KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111974473
Entry
111974473         CDS       T05762                                 
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111974473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111974473
   03016 Transfer RNA biogenesis [BR:salp03016]
    111974473
Enzymes [BR:salp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     111974473
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     111974473
Transfer RNA biogenesis [BR:salp03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    111974473
SSDB
Motif
Pfam: PAP_assoc MTPAP-like_central NTP_transf_2 Polbeta PAP_NTPase
Other DBs
NCBI-GeneID: 111974473
NCBI-ProteinID: XP_023857946
Position
LG15:66242489..66259100
AA seq 461 aa
MNAVSQVASAECICGPVAACVCYVLKVQVFGSFSTGLYLPTSDIDLVVFGNWENLPLWTL
EEALRKKNVTDENSIKVLDKATVPIIKLTDFRTEVKVDISFNVKNGVNAALLIKDYKKKY
PVLPKLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHYREDACSPNANVGVLLI
EFFELYGRHFNYLKTGIRIKDGGSYVAKDEIQKSTDLYRPSMLFIEDPLAPDNDVGRSSY
GVLQVKQAFDYAYIVLNHAVSPIAKYYPNNESESILGRIIRVTQEVAEYRDWITKLWGPQ
SQNEPALNGNDVTLLVKPQRLDECNNNLTEEVTASRSKTSSNSSSLASSSSSTVSSSSDV
DSDGTPCKTVKQLPGRGSSAHRESSGGVTNHRTQRHTTSTPTDNKGGKARLFRSSSKNTH
HAQQNSSSSNIKSHPSSKPHYQGNSKKRKPQQHSEAQDLCR
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaatgctgtcagccaggttgcctctgcagagtgtatctgtgggcctgttgctgcctgt
gtgtgttatgtgttgaaggttcaagtgtttgggagtttcagcacgggcctctatctgcca
accagtgacatcgatctggtggtgtttgggaactgggaaaacctgcccctttggaccctg
gaagaggccctgcggaagaaaaacgtgactgacgagaactccatcaaagtgctggacaag
gccacggtacccatcatcaagctgacagacttccgcacagaggtgaaggtggacatcagc
ttcaatgtgaagaacggagttaacgctgcccttctcatcaaagactacaaaaagaaatac
ccagtgcttccgaagttggttctggtgctgaagcagttccttctccagagggatctgaac
gaggttttcactggagggatcggctcctacagcctcttccttatggctgtcagcttcctg
cagcttcactacagagaagatgcgtgcagccccaatgccaacgtgggcgttctccttata
gagttctttgagctctatgggcgccacttcaactacctgaagacgggcatccggatcaaa
gatggcggcagctacgtggccaaagacgagattcagaagagcactgacctctacaggccc
tccatgctcttcattgaggaccccctagccccagataacgacgttggccgcagctcatac
ggtgtgttgcaggtgaagcaggcctttgactatgcctacatagtgctcaaccacgccgta
tcgcccatcgccaagtactaccccaacaacgagtctgagagtatactcggcagaataatt
cgggtgacccaggaagtggctgaatacagggactggatcaccaagctctggggaccacag
tctcagaatgaacctgccctgaatggaaatgatgtcacactgttagtgaagcctcagcgg
ctggacgagtgcaacaacaacctgacggaggaggtgactgcatctcgcagcaagacctcc
tccaactcctcctcattagcgtcatcctcatcctccacggtatccagttccagcgacgtt
gattctgacgggacgccctgtaagacagtgaagcaactgcctgggcggggctccagcgcc
cacagagaatcctcaggtggcgtgaccaatcacagaacacagaggcacaccaccagcact
cctactgacaacaaggggggcaaggccaggttgttccgctcgtccagtaaaaacacccac
cacgcacagcagaactcgtcctcatccaacatcaagagccacccgagcagcaagccacac
taccagggcaacagcaagaagaggaaacctcagcagcactccgaggcccaggacctctgc
agatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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