KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111976565
Entry
111976565         CDS       T05762                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111976565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111976565
   03041 Spliceosome [BR:salp03041]
    111976565
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111976565
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111976565
Spliceosome [BR:salp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111976565
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 111976565
NCBI-ProteinID: XP_023861252
Position
LG17:complement(27709692..27714596)
AA seq 404 aa
MSKEAPREPEQLRKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFVT
YSGVNEVDAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHL
RDYFEQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCEVRKAL
SRQEMQTTGVGMRGGRGGGGNYGRGGGYGGNDFGRDGGYFDGRGDADSSVSGGRGGGYGG
GDGGYNNGYGGGDGGYGGGPGGYGGNRGYGGGQGYGGGHGGGYGGGNGYNDYNNGNGGNF
GGGKSMASPQEAAPVGGNFGGGGGNNYNDFGNYNNQASNYGPMKSNNFGGSSGGGGGSGG
GSSGGSGGGGGGGGRSSGPYGGGYGGNSGGGGGGYGGGSGGRRF
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgtcgaaagaggccccacgtgaacccgagcagctccgcaaactgttcatcggaggtctg
agcttcgaaaccacggatgagagtttgcgagaacacttcgaacaatggggatctcttaca
gattgtgtggtcatgagagatccagccaacaaacgctctagaggttttgggtttgtcacc
tactctggtgtgaacgaggtcgatgctgccatggaagcacgcccccataaggttgatggt
aggctggtagagcccaagagggctgtttccagagaggactctagccgtccaggcgctcat
gtcacagtgaaaaagatatttgttggcggtatcaaggaagacactgaagactcccaccta
cgagactactttgagcaatttggcaagattgaagtaatagacattatgaccgaccgcacc
agtggcaagaagaggggcttcgcctttgtcacgtttgatgaccatgatgcagtggacagg
attgtcatccagaaataccacacgttgaacggtcacaattgcgaagtgaggaaagcattg
tccagacaggagatgcagacaacaggagtgggtatgaggggtggccgcggaggtggcggc
aactatggcagaggtggaggatatggaggtaatgattttggccgtgatggtggatacttc
gatggccgtggtgacgctgactcgtctgtttcaggaggcagagggggtggatacggagga
ggagatggcggttacaacaatggttatgggggaggtgacggtggttatggtggaggccct
ggtggttatggtggtaaccgtggctacggcggaggacaaggttatggtggtggacayggt
ggcggctacggtggtggaaatggctataacgactacaacaatggcaatggtggaaacttt
ggcggcggtaagtccatggcttccccacaagaagcagccccagttggtggaaactttggc
ggcggtggcggtaacaactacaatgactttggcaactacaacaaccaggcttccaactac
ggcccaatgaagagtaacaactttggaggcagcagtggcggcggtggaggtagcggtggt
ggcagcagtggtggaagcggcggtggtggtggcggcggcggcaggagtagcggcccatat
ggaggtggatatggaggtaactcaggaggtggtggcggtgggtatggcgggggctccggt
ggacgacgattctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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