KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111977644
Entry
111977644         CDS       T05762                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:salp03041]
    111977644
Spliceosome [BR:salp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    111977644
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    111977644
SSDB
Motif
Pfam: MA3 MIF4G DUF7026
Other DBs
NCBI-GeneID: 111977644
NCBI-ProteinID: XP_023862953
Position
LG2:complement(28225108..28274294)
AA seq 1062 aa
MATKTNDLAVELSSTSKEEHSRSSGMGQPRRSPSEEGERETDVAQQRSSMEATEGADSPA
ASPGPEGPRAASPSSEAPIVLGCPGVASPGVASSRATRGSRAPSSASQEEDESSGSDDGS
SDEAVGCRMKSSVAQIMRGPDDQRANRGRSPTPDDRDGDRRSSCSRSRSRSQERDRRYGG
GDYGRSREDDRNRDRYYDRQSSRDRAAEFRRRGRSPSPAKKDPAAEEPPVKKKKEELDPI
LTRTGGAYIPPAKLRMMQAQITDKSSLAYQRMSWEALKKSINGLINKVNVSNIAMIIQEL
LQENIVRGRGLLARSTLQAQSASATFTHVYAAVVAIINSKFPQIGELILKRLILNFRKGY
RRNDKAQCLTASKFVAHLVNQNVAHEVLCLEMLTLLLERPTDDSVEVSISFLKECGLKLT
EVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPIVPEGLDLVEEEDQ
FTHMLPLEDDYNQEDILNVFKMDTDFLENEEKYKAIKKEILDEGSSDSGEDANGSDDEDD
DNDGEKEGEEGGDEAEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPDS
QTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKDYMESFEAIFMEQYETIHRLETNKL
RNVARMFAHLLYTDSVPWSVLECIKVSEDTTTSSSRIFVKILFQELCAYMGLPRLNERLK
DMTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKIIMTQNQEVESS
DTDSSSDSSSSDSDSSDSDSSDSSSDSSSSSSSSSDSDSRRKKSKGQSKNKKSDKDKKKD
KMTKSKASSKNTSSNQKSPLEERPNKSLRNDNRRRDDSSSDEEAAKRGGRRPEPEDHHKS
SRHRGREEDAPQPSYERPHRDRGGHQDEEQPRGRPDRGRDYEDSDRQPESRRHNRDDGGK
YDGKRQAPQVDQTDHDRVRHRSPEKEKEPARYRNRERSKSREKSSHKEKDMDSSRNSYRN
GVEQQAERADKENRENRHHSDRYREPKRNEERSRDSSPRRRR
NT seq 3189 nt   +upstreamnt  +downstreamnt
atggctacgaagacaaacgatttagcagtggagttgagctctacttctaaagaagagcat
tccaggtctagtggcatgggtcagccccgcaggagcccatcagaggaaggagagagggaa
accgatgtggcacagcagaggagcagcatggaagctacagagggggcagatagccctgca
gccagtcctggacccgaaggtcccagagcagccagtcccagctcagaggcccccatagtt
ctcggctgtcctggagtggccagtccaggagtagccagctccagagccaccaggggtagt
agggccccatccagtgccagccaggaggaagatgagtccagcggctctgacgatgggagc
agtgatgaggcagtaggctgcaggatgaagagcagcgtggcacagatcatgcgtggtcca
gatgaccagagagcgaacagaggcaggagccccaccccagatgacagggatggtgatcgc
cgcagttcctgctctaggtcccgctccagaagtcaggagagggaccggcgctacggtgga
ggagattatggcaggtcaagggaggatgatcgtaacagggaccgatactacgaccgccag
tcgagtcgtgacagagcggctgagttcaggaggagaggccggtcgccctccccagccaag
aaagaccctgctgcagaggaaccaccagtgaagaagaagaaggaggaactggaccctatc
ctgaccaggactggtggagcttacatccccccggccaaactgcgcatgatgcaggcccag
atcactgacaagagcagtctggcgtaccagcgtatgagctgggaggctctgaagaagtcc
atcaacggtctgatcaacaaggtgaatgtgtccaacatcgccatgatcattcaggaactg
ctgcaggagaacattgttaggggcagaggtctcctggccaggtccaccctgcaggcccag
agtgcttcggccaccttcacccacgtctatgctgctgtggtagccatcatcaactccaag
ttccctcagataggagagctcatcctcaagagactcatccttaacttccgcaagggctac
cggaggaacgacaaggcacaatgtctcacagcatcaaagtttgttgctcacctcgtcaat
cagaatgtggcccatgaggtcttgtgtctggagatgttgactctgctcctggagagacct
actgacgacagcgtggaggtgtccatcagcttcctcaaggagtgtggcctcaaactcacg
gaggtttcccctaggggcatcaatgccattttcgagcggctgcgcaacatccttcacgag
tcagagattgacaagcgggtgcagtacatgatcgaagtgatgtttgccatcaggaaggat
gggtttaaggaccaccctatcgtcccagaggggctggacctggtggaggaagaagatcag
ttcacacacatgctgcccctagaggacgactacaaccaagaagatatactcaatgtcttt
aagatggatacagacttcttggagaacgaggagaagtacaaagcaattaaaaaggagatc
ctggatgagggcagcagcgactctggagaggatgccaatggaagtgatgatgaagatgat
gataatgatggagaaaaggagggggaagagggtggagatgaagcagagaaggtcaccatc
tttgaccagacggaagtcaacctagtcgcatttcgccgtaccatctatctcgccatccag
tcaagtttggactttgaggagtgtgcccacaaattgatcaagatggactttcctgacagc
caaacgaaagagctgtgcaacatgattctggactgctgtgcccaacagaggacctacgag
aagttctttggtcttctagcagggaggttttgtctgctgaagaaggactacatggagagt
tttgaggccatcttcatggagcagtatgaaaccatccatcgcctagagaccaataaactg
aggaacgttgctagaatgttcgcccatctcttgtacacagactcagtcccgtggagtgtg
ctggaatgtattaaagtcagtgaggacaccaccacctcatccagtcgtatcttcgtcaag
atcttgtttcaggagctctgtgcctatatgggacttcccaggctcaatgaacgacttaag
gatatgacgctgcagcccttctttgagggtctttttcctcgtgacaaccccaggaacacc
agattcgccattaatttcttcacctccatcggcctgggtggacttactgatgagctccgt
gagcatctaaagaacgcccccaagattatcatgacccagaaccaggaagtggagtcgtct
gacaccgactcgtcctctgactcgtcgtcctcagacagtgacagcagcgacagtgacagc
tctgactcctccagtgactcctcctcctcctccagcagcagctcagattctgattcaagg
cgtaagaagagcaagggccagagcaaaaataagaagagtgacaaagacaagaagaaagac
aagatgaccaagtccaaggcttcttccaaaaatacctcctcaaatcagaagtcacctctg
gaggaacggcccaataagagtctgagaaacgacaaccgtcgccgtgatgacagcagtagc
gatgaggaggcggcgaagcgcggtgggaggagaccagagccagaggaccaccacaaatcc
tctcgccaccggggtcgagaagaagacgcaccgcaaccctcgtacgagagaccccaccgc
gaccgtggggggcaccaagatgaggagcagcctcgtggcaggcctgacagaggcagagac
tacgaggacagcgacagacagccagagtcccgcaggcacaaccgggacgatggggggaaa
tatgatgggaaacgccaagccccccaggttgaccagactgaccatgacagagtcagacac
cgcagccctgagaaagagaaggaaccagccaggtacagaaacagagagaggtcaaagtca
cgagagaagagcagccacaaggagaaagacatggattcttccaggaactcgtacaggaac
ggggtggagcagcaagcagagcgggcggacaaggagaacagggagaaccgccatcactct
gacagatacagagaacccaagagaaacgaggaacggagcagggatagctccccacgtaga
cggagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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