KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111978573
Entry
111978573         CDS       T05762                                 
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
  KO
K17908  autophagy-related protein 18
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04136  Autophagy - other
salp04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111978573
   04136 Autophagy - other
    111978573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    111978573
   03029 Mitochondrial biogenesis [BR:salp03029]
    111978573
Membrane trafficking [BR:salp04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    111978573
Mitochondrial biogenesis [BR:salp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    111978573
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WD40_MABP1-WDR62_2nd WD40 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd BCAS3_WD40 Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_Vps41 CPSF_A Beta-prop_NWD2_C Beta-prop_RSE1_2nd Beta-prop_HPS5 EIF3I
Other DBs
NCBI-GeneID: 111978573
NCBI-ProteinID: XP_023864463
Position
LG18:complement(65540437..65563963)
AA seq 446 aa
MEERETSDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
RDEAPQEAQQEEEESEDGRSLPPSTSPSYAATVSLPSTPPSSTTLTGYSEDGGAEKGDVI
PEHEFAEGPVCLDDENEFPPVSKQTN
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaggaacgggagacatccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacctctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccacgaaggagcggagtgtccagacgtgtac
atcgtggagcggttgttctctagcagtctggtggcggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtg
tacatccacaacatcaaagacatgaagctgctgaagacgctgctcaacacgccccacaac
ccctcgggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcagaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacatttaacgcttcaggaacaaaactg
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagacgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgtgcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcgtctgctggtggcatcatcagatggacatctctacatctat
aacattgacccacaggatggaggagagtgtgttctggtcaggaaacacaggctatttgaa
agagatgaggcgccacaggaagcacaacaggaagaggaggagtcagaggatggaaggtcc
ctcccaccgtcaaccagcccatcatacgctgccactgtgtccctcccctcgaccccacct
tcttctaccactctcacaggctactcagaggatggaggggctgagaaaggggatgtgatc
cctgaacatgagtttgccgagggacccgtctgtctggatgacgagaacgagtttcctccc
gtcagcaaacagaccaactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (19)   
   Pfam (19)   
All databases (25)   

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