KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111981671
Entry
111981671         CDS       T05762                                 
Name
(RefSeq) AP-2 complex subunit alpha-2 isoform X1
  KO
K11824  AP-2 complex subunit alpha
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04142  Lysosome biogenesis
salp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111981671
   04142 Lysosome biogenesis
    111981671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    111981671
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:salp04147]
    111981671
Membrane trafficking [BR:salp04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    111981671
Exosome [BR:salp04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   111981671
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 RIX1 HEAT_2 HEAT_EF3_N HEAT_GCN1 HEAT_MROH2B_1st TOR1L1_N DUF4003
Other DBs
NCBI-GeneID: 111981671
NCBI-ProteinID: XP_023868826
Position
LG20:complement(15524227..15587488)
AA seq 986 aa
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL
SSRNPTFMCLALHCIANVGSREMAEAFAGEIPRILVAGDTMDSVKQSAALCLLRLYKASP
DLVLMGEWTSRVVHLLNDQHMGVVTAAISLITCLSSKNPDEFKTCVSLAVSRLSRIVSSA
STDLQDYTYYFVPAPWLSCKLLRLLQCYPPPEDGAVKGRLVECLETILNKAQEPPKSKKV
QHSNAKNAILFEAISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
FSHEAVKTHIETVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVAEMLSYLETADYSI
REEMVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAA
KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPLVQFNLLHSKFHLCSVPTRAL
LLSAYIKFINLFPETKATIQEVLRSDSQIRNSDVELQQRAVEYLKLSSIASTDVLATVLE
EMPPFPERESSILAKLKKKKGPGAVSVELEDGKERGELNGGGDRGGEAAIAASNASTPSP
SADLLGLRSAAPVSGAAPSAGSLLVDVFSEAGPAASSAGVNDDGFLSALHAPEASDSPLV
EGPGDSDSAPPTAASEDPAPPLPESDELLNKFVCKNNGVLFENQLLQIGIKSEYRQNLGR
MYLFYGNKTSVQFVSFNTTVSCPGELQSQLNVQTKTVEPLVEGGAQVQQVINIECLTDFI
DAPLLNIKFRYGGALQNISLKLPVTINKFFQPTEMAAADFFQRWKQLSQPQQEAQKIFKA
SHGMDTEVLKAKLLGLGTALLENVDPNPENYVCAGVIQTKAQQVGCLLRLEPNAQAQPGE
QMYRLTLRSSKDTVSQRVCDLLAEQF
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgccggctgtgtcgaagggagatgggatgcgcggattagcggtgttcatttcggacata
cggaattgtaagagcaaggaggcggagatcaagcggatcaataaggagctggccaacatc
cgctccaagttcaagggggacaaggcactggatggctatagtaagaagaagtatgtctgc
aagctgctcttcatcttcctgctgggacatgacatcgactttggacacatggaggctgtc
aacctgctcagctccaacaagtatacagagaaacagatcggatacctgttcatctcggtg
ctggtaaacagcaacagcgagttgatccgcctcatcaacaacgccatcaagaacgacctg
tctagccgcaaccccaccttcatgtgcctggccctgcactgcatcgccaacgtgggcagc
cgtgagatggccgaggcctttgctggagagatcccacgcattctggtggccggggacacc
atggacagtgtgaagcagtctgctgccctgtgtcttctgcgtctgtacaaggcctcccca
gacctggttctgatgggggagtggacctcccgggtagtgcacctcctcaacgaccagcac
atgggtgttgtcacggcagccatctccctcatcacctgtctcagctcgaagaacccagat
gagttcaaaacctgtgtgtccctggctgtttctcgtctgagcaggattgtgtcatcagcc
tccactgatctgcaggactacacctactactttgtaccggccccgtggctgtcctgtaaa
ctgcttcgcctgctgcagtgctaccccccgccagaggatggcgccgtgaagggccgcttg
gtggagtgtctggagaccattctgaacaaggcccaggaaccacccaagtccaaaaaggtt
cagcactccaacgccaagaacgccatcctgttcgaggccatctcactcatcatccactac
gacagtgagcccaacctgctggtgcgtgcctgtaaccagctgggtcagttcctgcagcac
agagagaccaacctgcgctacctggctctggagagcatgtgtaccctggccagctctgag
ttctcccatgaggccgtcaagacccacatcgagaccgtcatcaacgcactcaagactgaa
agggatgtgagtgttcgccagagggctgctgacctgctctacgccatgtgtgaccgtagc
aacgccaagcagatcgttgccgagatgctcagctacctggagacagccgactactccatc
agagaggagatggtgttgaaggtggccatcctggcagagaagtatgcggtggactactca
tggtatgttgacaccatccttaacctcatccgcattgccggggactacgtcagtgaggag
gtgtggtaccgcgtcatccagattgtcatcaaccgcgacgatgtgcagggctacgccgcc
aagaccgtcttcgaggctctacaggccccagcctgtcatgagaacatggtgaaggtgggg
gggtacatcctgggagagtttggaaacctcattgccggggacccccgctccagccctctg
gtccagttcaacctgctccactctaagttccacctgtgttcggtgcccacgcgcgccctg
ctgctctccgcttacatcaagttcatcaacctgttcccagagaccaaggccaccatccag
gaggtgcttcgctccgacagccagatcaggaactctgacgtggagctgcagcagagggcc
gtggagtacctcaagctctcttccatcgccagcaccgacgtcctggctactgtgctggag
gagatgcctccctttccagagagggagtcatccatcttggccaagctgaagaagaagaag
ggtccgggtgccgtgtcggtagagctggaggacggcaaggagagaggagagctcaacggt
ggaggggacagggggggcgaagctgccatcgcagcctctaacgcttccaccccatcccct
tcagcggatctgcttggccttcgttcggccgctcccgttagtggggccgctcccagtgca
ggcagcctattggttgatgtgttttcagaggcagggcctgcagcctcctctgccggcgtg
aacgacgacggcttcctgagcgctcttcacgctcccgaggcctctgactccccattggtg
gagggtcctggtgactcggactctgctccccctactgcggcctctgaggatcctgcccct
cctctgcccgagtcagacgagcttctcaacaaatttgtgtgtaagaacaacggtgtgttg
tttgagaaccagctgcttcagatcggcatcaagtctgagtaccgtcagaacctggggagg
atgtatctgttctatggcaataaaacctcggtgcagtttgtcagctttaacaccacagtc
agctgcccaggggagctgcagtctcagctcaacgtgcagaccaaaacagtggaaccccta
gtggagggaggagcacaggtgcagcaggttatcaacatcgagtgtctgactgactttatt
gatgctccgctgctcaacatcaagttcaggtatgggggagccctgcagaacatctctctc
aagctgcctgtcaccatcaacaagttcttccaacccacagagatggccgccgcagacttc
ttccagcgctggaaacaactcagccagccccagcaagaagcacaaaagatcttcaaggcc
agccatggcatggacacagaagtgctcaaggccaagttgctgggcctggggacagccctg
ttggagaatgtggatcctaacccagagaactatgtgtgtgccggagtcatccagaccaag
gcccaacaggtcggctgcctgctgagactggaacccaatgcgcaggcccagcctggcgag
cagatgtaccggctgactctgcgcagcagcaaggacaccgtttcccagcgcgtctgtgac
ctcctggcagaacagttctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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