KEGG   Salvelinus sp. IW2-2015 (Arctic char): 112068226
Entry
112068226         CDS       T05762                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03410  Base excision repair
salp04140  Autophagy - animal
salp04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112068226
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112068226
  09143 Cell growth and death
   04217 Necroptosis
    112068226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:salp03036]
    112068226
   03400 DNA repair and recombination proteins [BR:salp03400]
    112068226
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:salp04147]
    112068226
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    112068226
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     112068226
   MMR (mismatch excision repair)
    Other MMR factors
     112068226
Exosome [BR:salp04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112068226
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5 NOA36
Other DBs
NCBI-GeneID: 112068226
NCBI-ProteinID: XP_023991088
Position
Unknown
AA seq 193 aa
MGKDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPLSPKEKGKFE
DMAKQDKGRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS
IGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGRVDTASSAAADDDDE
DEEDDDDDEDDDE
NT seq 582 nt   +upstreamnt  +downstreamnt
atggggaaagatcctaggaagccgagaggcaagatgtcctcatatgcttacttcgtgcag
acctgcagggcggagcacaagaagaaacaccccgaagccagtgtcaacttcgccgagttc
tccaagaaatgctcagagcgatggaagcccctgtctcctaaagaaaaaggaaagtttgaa
gacatggcgaagcaagacaagggccgctacgagagagaaatgaagaactacatcccaccc
aatggccagaaaaagaagaggttcaaggatcccaatgcccccaagagaccgccgtctgcg
ttcttcatcttctgtgctgacttccgggccaagataaagagcgagcacccaggcctgtcc
attggagacactgctaagaagctgggagtgatgtggaacagctctgcagctgaggagaag
aagccgtacgagaagaaggcagccacgctgaaggagaaatatgacaaggatattgcatca
taccgcaccaatggtagagtggatactgcctcctccgcagctgctgatgacgacgacgaa
gatgaggaggatgacgacgacgatgaggatgatgacgagtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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