KEGG   Streptomyces aquilus: EJC51_35185
Entry
EJC51_35185       CDS       T07011                                 
Name
(GenBank) RecQ family ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
saqu  Streptomyces aquilus
Pathway
saqu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:saqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EJC51_35185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:saqu03019]
    EJC51_35185
   03400 DNA repair and recombination proteins [BR:saqu03400]
    EJC51_35185
Enzymes [BR:saqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EJC51_35185
Messenger RNA biogenesis [BR:saqu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EJC51_35185
DNA repair and recombination proteins [BR:saqu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EJC51_35185
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 RecQ_Zn_bind Pribosyltran AAA_22 SWI2_SNF2
Other DBs
NCBI-ProteinID: AZP20857
UniProt: A0A3S9I901
Position
7622008..7624167
AA seq 719 aa
MDNLELRAEADAVLAELVGAPDGSARLREDQWQAVAALVEDRRRALVVQRTGWGKSAVYF
VATALLRRRGAGPTVIVSPLLALMRNQVESAARAGIRARTINSANPEEWDTIHEEVERGE
TDVLLVSPERLNSVDFRDQLLPKLAATTGLLVVDEAHCISDWGHDFRPDYRRLRAMLTEL
APGVPVLATTATANARVTADVAEQLGTGAGEALVLRGPLERESLRLGVVQLPDAAHRLAW
LAEHLDELPGSGIIYTLTVAAAEEATAHLRQRGHQVASYTGRTENADRLQAETDLLENRV
KALVATSALGMGFDKPDLGFVIHLGSPSSPIAYYQQVGRAGRGVAHADVLLLPGKEDEAI
WRYFADTAFPPEAQVRQTLAALAEAGRPLSVPALEAVVDLRRTRLETMLKVLDVDGAVKR
VKGGWIATGEPWVYDAERYAWVARQRAAEQQAMRDYVSTAGCRMEFLRRQLDDEGAAPCG
RCDNCAGAWADTSVSAETLTAATKELDRPGVEVEPRRMWPTGMPALGIDLKGRIPAKEQC
STGRALGRLSDIGWGNRLRPLLAEDAPDGPVPDDVLRAAVAVLADWARSPDGWASGAVEA
ATRPVGVVAVPSLARPRLVGSLAEGIAGIGRLPFLGTLTYTGPGGAHAARRSNSAQRLRA
LSGSFAVSDELAEALARTPGPVLLVDDYTDSGWTLAVAARLLLRAGSERVLPLVLAAAG
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggacaacctggaactccgtgccgaagccgatgccgtcctcgccgagctggtcggggcc
ccggacggctccgcgcggttgcgggaggaccagtggcaggcagtggcggcgctggtggag
gaccgacggcgcgcgctggtggtgcagcgcaccggctggggcaagtcggcggtgtacttc
gtcgccaccgcgttgctgcgccggcgcggagcgggcccgacggtgatcgtctcgccgctc
ctggcgctgatgcgcaaccaggtcgagtcggcggcgcgggccgggatcagggcgcgcacc
atcaactcggccaaccccgaggagtgggacaccatccacgaggaggtggagcgaggtgag
accgacgtgctcctggtcagccccgagcgcctcaactccgtagacttccgcgaccagttg
ctgcccaagctggcggccacgaccggcctgctggtggtcgacgaggcgcactgcatctcc
gactgggggcatgacttccggcccgactaccgccggctgcgggcgatgctcaccgaactc
gctcccggggtgccggtactggcgaccacggcgaccgccaacgcgcgcgtgaccgcggac
gtggccgagcagctcggtaccggcgcaggagaggcgctggtgctgcgcggcccgctggag
cgggagagcctgcgcctcggcgtcgtccaactgccggacgcggcacaccgcctggcctgg
ctcgccgagcatctggacgagctgccgggttccggaatcatctacacgctgacggtcgcc
gccgccgaggaggccaccgcccatctgcggcagcgcggccaccaggtcgcctcctacacg
ggacgcacggagaacgccgaccggctccaggccgagaccgacctgctggagaaccgggtc
aaggcgctcgtcgcgacctcggcgctgggaatgggcttcgacaagcccgacctggggttc
gtcatccatctcggctcgccgtcctcgccgatcgcctactaccagcaggtcggccgcgcg
ggacgcggggtggcccacgccgatgtgctgctgctgccgggcaaggaggacgaggccatc
tggcgctacttcgccgacaccgccttcccgccggaggcacaggtccgccagaccctcgcg
gcgctggccgaggcgggccggccactgtccgtgcccgccctggaggcggtcgtggacctc
cggcgcacccggctggagaccatgctcaaggtcctcgacgtcgacggggccgtcaagcgg
gtcaagggcggctggatcgccaccggcgagccctgggtctacgacgccgagcggtacgcc
tgggtggcacggcagcgcgcggccgagcagcaggccatgcgcgactacgtgagcacggcc
gggtgccggatggaattcctgcgccgccagctggacgacgaaggggcggccccctgcggc
cgctgcgacaactgcgccggagcctgggccgacacctccgtctcggcggagacgctgacg
gcggcgacgaaggaactggaccgtccgggcgtcgaggtcgaaccacgccggatgtggccg
accgggatgcccgcgctgggcatcgacctcaagggccgcatcccggccaaggaacagtgc
tccaccgggcgcgctctggggcggctctccgacatcggctggggcaaccggctacgtccg
ctgttggccgaggacgcccccgacggcccggtccccgacgacgtactgcgggccgcggtg
gccgtcctcgccgactgggcgcgctcgcccgacgggtgggcctccggggccgtggaggcc
gccacccggccggtgggcgtcgtcgccgtaccgtccctggcccgcccccgcctggtgggt
tccctggccgagggcatcgccggcatcggccgcctcccgttcctgggcacgctgacgtac
acgggcccgggaggtgcgcacgcggcccggcgcagcaactccgcccagcggctcagggcg
ctgtccggcagcttcgccgtctccgacgagctcgccgaagcactggcccgcacacccggc
cccgtcctgctcgtggacgactacaccgactccggctggaccttggcggtcgcggcccgg
ctgctgctccgagccgggagcgagcgggtgctgcctctggtgcttgccgcggcaggctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (10)   

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