KEGG   Salmo salar (Atlantic salmon): 106582271
Entry
106582271         CDS       T04363                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106582271
Spliceosome [BR:sasa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106582271
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    106582271
SSDB
Motif
Pfam: MA3 MIF4G DUF7026
Other DBs
NCBI-GeneID: 106582271
NCBI-ProteinID: XP_014020647
UniProt: A0A1S3NZ43
Position
ssa21:36636817..36704490
AA seq 1075 aa
MATETIDNDLAVELSPNSREEPPRTSGMDQPRRSRSGSRSPSEEGERENNVAQQKSNVEA
PEGADSPAAGPRDEGPRAASPGSEAPIVLGSPGVASSKATRGSRVPSNASVSQEGESSGS
DNESSDEDSNEGVARRMKSSVAQIVHGPDDQSVNKGRSPTPDDRDDDRRRSRSRSRSRSQ
ERDRRYGRGGYSGSRDDDRDRYYDRYERRSSRDREAEFRRRGRSPSPAQKDTAAEEPPVK
KKKDELDPILTRTGGAYIPPAKLRMMQAQITDKSSLAYQRMSWEALKKSINGLINKVNVS
NIAMIIQELLQENIVRGRGLLARSTLQAQSASATFTHVYAAVVAIINSKFPQIGELILKR
LILNFRKGYRRNDKAQCLTASKFVAHLVNQNVAHEVLCLEMLTLLLERPTDDSVEVSISF
LKECGLKLTEVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPIVPEG
LDLVEEDDQFTHMLPLEDDYNQEDILNVFKMDPDFLENEEKYKAIKKEILDEGSSDSGED
VDGSDDDDEDDGEKEGEEGGDEAEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFEECAHKL
IKMDFPDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKDYMESFEAIFMEQYETI
HRLETNKLRNVARMFAHLLYTDSVPWSVLECIKVSEDTTTSSSRIFVKILFQELCAYMGL
PRLNERLKDMTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKIIMT
QNQDVESSDSDSSSSSSDSSSSDSDSSDSDSSDSSTDSDSSSNSSDSDSRRKKSKGQNKK
KSDKDKKKDKKTKDKASSKKISLQKSPLEERPNRSLRHENRRRDDSSSDEEEAERSGGRP
GPEVRHKASRHRGRVEDAPPPTHERPDRADRGGHKDKELPRGRPGRDRDYEDGDRQPEAR
RHNKDDGGGNDGKHQAPQADRDRVRHRSTEKEKEPVSSRGRDREKERSKSRERSSRKEKD
MDSSRDSNRNGVERQAERAERADKENRENRHHSDRYREPRRNEERSRNSSPRRRR
NT seq 3228 nt   +upstreamnt  +downstreamnt
atggctacagagacaatcgacaacgatttagcagtggagctaagccctaattctagagaa
gagcctcccaggaccagtggcatggatcagccccggaggagtaggagtggcagcaggagc
ccgtccgaggaaggagagagggagaacaatgtggcacagcagaagagcaatgtggaagca
ccagagggggcagatagtcctgcagccggtcccagagacgaaggccccagagcggccagc
cctggatcggaggcccccatagttctgggcagtcccggagtagccagctccaaagccacc
aggggcagtagggtcccttccaatgccagtgtcagccaggagggggagtctagtggctct
gacaatgagagcagtgatgaagacagtaatgagggagtggcccgcaggatgaagagcagt
gtggcacagatcgtgcatggtccagatgaccagagtgtaaacaaaggcaggagccccacc
ccagatgacagggatgatgatcgccgtaggtcccgctccaggtcccgttccagaagtcag
gagagggatcggcgctacggtagaggaggttacagcgggtcaagggacgatgatcgagac
agatattacgaccgttatgagcgccggtcgagtcgggacagagaggctgagttcaggagg
agaggccgatcgccctccccagcccagaaggacactgctgcagaggaaccaccagtgaag
aagaagaaggatgaactggaccctatcctgacgcgaactggtggagcctacatccccccg
gccaagctacgtatgatgcaggctcagatcactgacaagagcagtctggcttaccagcgt
atgagctgggaggctctgaagaagtccatcaatggtctgataaacaaggtgaacgtatcc
aacatcgccatgatcatccaggaactgctgcaggagaacatcgtcaggggcagaggtctc
ctggccaggtccaccctgcaggcccagagtgcctcggccaccttcacccacgtctatgct
gctgtggtagccatcatcaactccaagttccctcagataggagagctcatcctcaagaga
ctcatccttaactttcgcaagggctaccggaggaacgacaaggcacaatgtctcacggca
tcaaagttcgttgcccacctggtcaatcagaatgtggcccatgaggtgctgtgtctggag
atgttgactctgctcctggagagacctacagacgacagcgtggaggtgtccatcagcttc
ctcaaggagtgtggcctcaaactcactgaagtctcccctagaggcatcaatgccatcttt
gagcggctgcgtaacatccttcacgagtcggagatagacaagcgtgtgcagtacatgatc
gaggtgatgttcgccatcaggaaggacgggtttaaggaccaccctatcgtccccgagggg
ctggacctagtggaggaggacgatcagttcacacacatgctgcccctagaggatgactac
aaccaggaagatatactgaatgtctttaagatggatccagacttcttggagaatgaggag
aagtacaaagcaattaagaaggagatcctggatgagggcagcagtgactctggagaagac
gtggatggaagtgacgacgatgatgaagatgatggagaaaaagagggggaagagggcgga
gatgaagcagagaaagtcaccatcttcgaccagacggaagtcaacctggtcgcatttcgt
cgcaccatctatctcgccatccagtcaagtttggattttgaggagtgtgcccacaagttg
atcaagatggactttcctgacagccaaacgaaagagctgtgcaacatgattctagactgc
tgtgcccaacagaggacctacgagaagttttttggtcttctagcagggaggttttgtctg
ctgaagaaggactatatggagagttttgaggccatcttcatggagcagtatgaaaccatc
catcgcctagagaccaataaactgagaaacgttgccaggatgtttgctcatctcctgtac
actgactctgtcccgtggagtgtgctggaatgtattaaagtcagtgaggacaccaccacg
tcgtccagtcgaatcttcgtcaagatcttgttccaggagctctgtgcctacatgggtctg
cccaggctcaatgaacgactcaaggatatgacgttgcagcccttcttcgagggtctcttc
cctcgtgacaaccccaggaacacccgattcgccataaatttcttcacctccattggcctg
ggtggacttacggatgagctccgtgagcatctgaagaacgcccccaagataatcatgacc
cagaaccaggacgtggagtcgtcagactccgactcgtcctcttcctcctctgactcgtcc
tcctcagacagtgacagcagcgacagtgacagctctgactcctccactgactccgactcg
tccagcaacagctcagattccgattctaggcgtaaaaagagcaagggccagaacaaaaag
aagagcgacaaagacaagaagaaagataagaagaccaaggacaaggcttcttccaaaaag
atctcccttcagaagtcacctctggaggaacggcccaataggagtctgagacacgagaac
cgtcgccgtgatgacagcagtagcgatgaagaggaggcggagcgcagtggggggagaccc
gggcctgaggtccgccacaaagcctctcgccaccggggtcgagtagaagacgctccgcca
cccacgcacgagagacccgaccgtgctgaccgtggagggcacaaagacaaggagctgcct
cgtggcaggcctggcagagacagagactatgaggacggggacagacagccagaggcccgc
aggcacaacaaggacgatggggggggaaacgatgggaaacaccaagccccccaggccgac
cgtgaccgagtcagacaccgtagcactgagaaagagaaggaaccagtgagcagtagaggc
agggacagagaaaaagagaggtcaaagtcacgggagaggagcagccgcaaggagaaggac
atggattcctccagggactcgaacaggaacggggtggagcggcaggcggagagggcagag
cgggcagacaaggagaacagggagaaccgccatcactctgacagatacagagaacccagg
cgaaacgaggaacggagcaggaatagctccccgcgcagacggagatag

  All links  
Gene (67)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (75)   

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