KEGG   Sorghum bicolor (sorghum): 8054964
Entry
8054964           CDS       T01086                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8054964
Spliceosome [BR:sbi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    8054964
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    8054964
SSDB
Motif
Pfam: MA3 HEAT_5MP1_2
Other DBs
NCBI-GeneID: 8054964
NCBI-ProteinID: XP_002456069
UniProt: A0A921RE31 C5XF95
Position
3:58053873..58060578
AA seq 792 aa
MAASASASPPRHRHSHRDEVSPRRRKRRASPSPSPPRSPSPGVDADRRRRSRASPPDSDH
RGRRRDAKPSEEKNGHAKPGRDEDGDNHPPRRDRVSDGEDGFQRRRMRDRVSGDEKEEGR
RHRRARDADDAPDYRRGKRDRERDSRCHRRRSPSSESGSSPDDRRHRRRRRDEGSRRRDD
RRRREDDGDERRRSPVKREPTPPLPPPPPLLPEMIPGRTGGIYIPPFRMAQMMRDVEDKS
SPEYQRLTWDALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMASPG
FTDVFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQVVAH
ELVALELLTVLLENPTDDSVEVAVGFVKECGAMLQDLSPQGLHAIFERFRGILHEGEIDK
RVQFLIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDLDPETNLNVFRANPN
FVEDEKAYENLKRSILGAESSEDEEGSDAASDDDEDEEESDEEDEEQMEIRDRTETNLVN
LRRTIYLTIMSSVDFEEAGHKLMKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRF
CMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEED
TTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQGSFESIFPKDHPKNTRFSINFFTSI
GLGGITESLREYLKNMPRLIMQQQKPESSQSESGGSESGSECSSSGSSSESESESSSDES
DRRRSKKRRKRT
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggccgcctccgcctccgcctccccgccgcgccaccgccacagccaccgcgatgaagtc
tccccgcgccgccgcaagcgccgcgcgtccccgtctccgtccccaccccgctcaccatct
cccggcgtcgacgcggaccgccgtcgcagatctagggcttcgccgcccgattccgaccac
cgcggccgccgccgcgacgccaagccctcggaggagaagaacggccacgccaagcccgga
agggatgaggacggcgacaaccaccctccccggcgcgacagggtttcagatggggaggat
ggtttccaacgccggaggatgcgcgatagggtttccggcgatgagaaggaggaaggccgt
cggcacaggcgtgctagggatgcggatgacgcgcctgactaccgccgtggcaagcgagac
cgggagagggacagccggtgccaccgccgccggagccctagctcggagtcagggtcctca
cccgacgaccgtcgacaccgccgccggcgccgagacgagggctccaggcggcgggatgac
cgcaggcgaagggaggacgacggagacgagcgccggagaagccctgtgaagagggagccg
accccgccactgcctccaccaccaccactgcttccggagatgatccctggccgcacaggt
gggatctacattccgcctttccgcatggcgcagatgatgcgtgatgtagaggacaagtcg
agcccagagtatcagcgcctcacctgggatgctctcaagaagagcatcaatgggttggtg
aataaggtgaatgcgaccaatatcaagaatatagtgccggagctcttcgcagagaacctt
gttcgtgggcgggggctcttctgtcagtcttgcatcaagtcacagatggcctcacctggg
ttcaccgatgtatttgctgcgctagttgcggttgtgaataccaagttccctgagattggg
cggttgcttcttgttcgtgttgtgctccagctcaagagggcatataagcgaaatgacaag
cctcaattgcttgcggcaaccaaattcattgcgcacttggtaaatcaggtggtggcacat
gagcttgtggcgctggagcttcttactgtactcctggaaaatccaactgatgatagtgtt
gaggtcgctgtggggtttgtcaaagagtgtggggcaatgctgcaggacttgtctcctcaa
gggcttcatgctatttttgaaagatttcgaggcattctacatgaaggagaaatagacaag
agagtgcagtttcttattgaaggcctttttgcaattagaaaggctaaattccagggtttc
ccagccatccgtccagagctggatctagtggagcaggaggaccagtttacacatgagata
tcccttgaagatgacctagaccctgagaccaatctaaatgttttcagggcaaaccccaat
tttgttgaagatgagaaggcatatgagaatctaaagagaagcatcctgggagcagagtct
tctgaagatgaagaaggatcagatgctgcttctgatgatgatgaagatgaggaagaatcc
gatgaagaggatgaggaacaaatggagataagggatagaacagagacgaatcttgtgaac
cttagaagaacaatatatttgactattatgtccagtgttgattttgaagaagctgggcac
aagcttatgaaaattaagcttgagcctggtcaagagatggagctgtgcattatgcttctt
gagtgttgcagtcaggagagaacatatcttcgttattatgggctgctaggacagcgattt
tgcatgatcaataaagtgtaccaagagaactttgaaaaatgctttgtgcaacaatattcg
atgattcatcgtcttgaaacaaacaagttgaggaatgttgccaagttctttgcacatttg
ttggggactgatgcgctcccttggcatgttttggcttacatcaggttgacagaggaagac
acgacatcatcttctcgaatttttataaaaattctattccaagaattatcggagcacctg
ggcatacgcctactcaatgagaggctgaatgatcctaacatgcaaggttccttcgaatct
atcttcccaaaggatcatccaaagaatacaaggttctcaatcaatttcttcacgtccatt
ggtcttggtggtataacggaaagcctgagggagtacttgaagaacatgccgcgcctaata
atgcagcagcagaagccggaatcatcgcagtcagaatcaggtggatctgaatctggttca
gaatgctctagctcagggtctagttctgagtctgagtcagaatcaagctctgatgagagt
gacaggaggcggagtaagaagaggaggaagaggacttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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