KEGG   Sorghum bicolor (sorghum): 8067787
Entry
8067787           CDS       T01086                                 
Name
(RefSeq) pre-mRNA-splicing factor cwc22
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8067787
Spliceosome [BR:sbi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    8067787
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    8067787
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 8067787
NCBI-ProteinID: XP_002446176
UniProt: A0A921QNS8 C5YD66
Position
6:6309534..6311153
AA seq 539 aa
MTPTRSARKRPRTPEVAPPPRKRRDGGIYVPPYRATDDESSYERRSWDALRRSITGLVNK
ATAANIRHVAPELLSENLVRGRGLLCRALLRSQAASTSSATAFTPVFAALAAVANARLPC
VGRLLLARLALRATRAHAAGDKHRLAASATFVAHLVNQGVATDLLALQLLALLLDRPTDG
GSVEVAVGLVTHCGAKLQESCPRGLSAVFDSLRSVLHDGDVDKRVQFLIEDLFAIRKAQF
RAHPPVQPELDLIEPDDQVTHQIELDGDQLDPEFHLDVFEPSPSFAQDEAAYEDLRRTML
GVGDDDKIQSSSPDDEETDSDDDASETDQPPAVVVRDQTDTDLINLRRTIYLTVMSSVSA
EEAGNKLLSVVRSGQEPELCAMLVECCRKAKAYTSYYGELGQRLCAVDRAYQAGFEACFA
GHYAAAHRMTTDELRASARFYAHLLAAADALPWRGALGRVRVTEQDTTSSSRIFIKLLFL
DLAEKLGVRTLSKKRNDDDADVRDVLFPRDCASNTRFAINFFTAIGLGGVTEAARKLIV
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgacgccgaccagaagcgcccgcaagcgcccgcggacgcccgaggtggctcccccgcca
cgcaagcgccgcgacggcggcatctacgtccctccgtaccgcgccaccgacgacgagtcc
agctacgagcgccgcagctgggacgcgctgcggaggagcatcacggggctggtgaacaag
gcgaccgccgccaacatccgccacgtggcgccggagctcctgtcggagaacctggtgcga
ggccgcggcctgctctgccgcgcgctcctccgttcccaggcggccagcaccagcagcgcc
acggccttcacgccggtcttcgcggcgctcgccgccgtcgccaacgccaggctcccctgc
gtcggccgcctcctcctggcgcgcctcgcgctccgcgccacgcgcgcccacgccgcgggc
gacaagcaccggctcgccgcgtccgccacgttcgtcgcgcacctcgtcaaccagggcgtc
gccaccgacctgctcgcgctccagctcctcgcgctcctcctcgaccgccccaccgacggc
ggcagcgtcgaggtcgccgtcggactcgtcacccactgcggcgccaagctccaggagtcg
tgcccgcgcgggctcagcgccgtgttcgactccctgcggagcgtcctccacgacggcgat
gttgacaagcgcgtccagttcttgatcgaggatctcttcgccatccggaaggcgcagttc
cgggctcaccctcccgtccagccggagctggatctcatcgagccggacgaccaggtgacg
catcagatagaactcgacggtgatcagctcgacccggagttccatcttgacgtgttcgag
cccagcccttccttcgcgcaagacgaggcggcatacgaggacctcaggcgaaccatgctc
ggagtcggagacgacgacaagatccaatcttcttctcctgatgacgaagaaaccgacagc
gacgacgacgcgtcagaaacggatcagccgccggcggtcgtggtccgcgaccagaccgac
accgatctgatcaaccttcggcggaccatctacctgacagtcatgtcgagcgtcagcgcc
gaggaagctggaaacaagctcctgtcggtggtgcgttccggccaggagccggagctgtgc
gccatgctcgtcgagtgctgcaggaaggcgaaggcctacacgagctactacggcgagctc
gggcagcggctgtgcgccgtcgaccgcgcgtaccaagccggcttcgaggcctgcttcgcg
gggcactacgcggcggcgcaccgcatgacgaccgacgagctgcgcgcgtccgccaggttc
tacgcgcacctgctggccgccgccgacgcgctgccctggcgcggcgcgctggggcgcgtc
cgggtcacggagcaggacacgacgtcgtcgtcgcgcatcttcatcaagttgctgttcctg
gacctcgccgagaagctcggggtccggacgctcagcaagaagaggaacgacgacgatgcg
gacgtgcgggacgtcctgttccccagagactgcgccagtaacacgcggttcgccattaat
ttcttcacggcgatcggcctcggaggtgtcaccgaggccgcgaggaagctcattgtgtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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