KEGG   Shewanella bicestrii: CF168_03775
Entry
CF168_03775       CDS       T05197                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
sbj  Shewanella bicestrii
Pathway
sbj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CF168_03775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbj03019]
    CF168_03775
Enzymes [BR:sbj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     CF168_03775
Messenger RNA biogenesis [BR:sbj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CF168_03775
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ASK68056
UniProt: A0A220UJG8
Position
complement(858127..859563)
AA seq 478 aa
MFRRISQFCKQLFEDAPKTTAPTPAQIEPQTPELTSGGLSLSLVPRDAHSISRKQISENA
LKVLYRLNKSGFQAYLVGGGVRDLLLGLEPKDFDVVTNATPEEIKKLFRNCRVVGRRFRL
AHIVFGRDVIEVATFRGHHGDSNEKISKANAEGRLLRDNVYGEIDEDAERRDFTVNALYY
DISDYSIRSYGGGMEDLKAGTLRLIGDPETRYREDPVRMLRAVRFATKLSMAIEEVTAKP
IKQLAPLLKDIPAARMYEEVLKLFFAGKAMANFEMMQEYKLFAPLFPQVDAQLKDAPKGP
AMKMVQAIMKSTDARVNEDKPVTPSFFYAAILWYPLRQRAEDIAVESGLTLYDAFFAAMG
DVIEQQCQTISIPRRFSTPAKDIWQLQLRFDRSQGTRAFKLLEHPKFRAAYDLLLLRGEV
EGGNVAKSAAWWQQFVEADEAERLNIARSGNKAAGNRNRNSPQRRRRRPSATKAKAAE
NT seq 1437 nt   +upstreamnt  +downstreamnt
atttttcgccgtatcagccaattctgcaagcagctatttgaagacgcgcctaaaacgacc
gctccgactccagctcagattgaaccccaaacgccagaactcacttcaggcggcttaagc
ttgtcgctcgtgcctcgggatgcgcattcgatttcccgcaagcagatcagcgaaaacgca
cttaaagtattataccgattgaataaatcaggttttcaggcctatttagtcggtgggggc
gtacgggatttactcctcggactcgaaccgaaagacttcgacgttgtgaccaatgcgacg
ccagaagaaattaaaaagctgtttcgcaattgccgcgtagtcggacgccgcttccgcctc
gcccatattgtgtttggccgcgatgtgattgaagttgccaccttccgtggccaccacggc
gacagcaatgaaaagatttctaaagccaatgccgaagggcgtttgctcagggataacgtg
tatggcgaaatcgatgaagacgcagagcgccgcgattttaccgtcaacgccctttactac
gatatcagcgactactctatccgtagctatggcggcggtatggaagatcttaaggcaggc
accttaaggctgattggcgatcccgaaacccgttaccgtgaagatccagtgcgtatgctc
agggctgtgcgttttgccactaagctcagcatggcgattgaagaagtgaccgctaaacct
atcaaacagttagcgccactgctcaaggacattccggccgcccgcatgtatgaagaagtg
ctcaaactcttcttcgccggcaaagccatggccaactttgagatgatgcaggaatataag
ctgttcgcgccgctcttcccgcaagtcgatgcccaattaaaagatgcgcctaagggccct
gcgatgaagatggtgcaagccatcatgaagagcacggatgcacgcgtgaacgaagataaa
cctgtcactccgtccttcttctatgcggcgatcctctggtatccactgcgccaacgcgcc
gaagatatcgccgttgaaagcggcctgaccttatacgatgcgttttttgccgccatgggt
gatgtgattgagcagcaatgccaaaccatcagcattccgcgtcggtttagcacgcctgcc
aaagacatttggcaattgcaattacgcttcgatcgcagccaaggcactcgcgcctttaaa
ctgctagagcaccctaaatttagagcggcctacgacttgctgttactgcgcggtgaagtc
gaaggtggcaatgtcgccaagagtgcagcatggtggcaacagtttgttgaagcggacgaa
gccgagcgtttgaatatcgcccgcagtggtaacaaagcggcgggtaaccgtaaccgcaat
tcaccacagcgccgtcgccgtcgcccgagtgccacgaaagccaaagccgccgaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (6)   

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