KEGG   Shewanella bicestrii: CF168_14090
Entry
CF168_14090       CDS       T05197                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
sbj  Shewanella bicestrii
Pathway
sbj02020  Two-component system
sbj02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sbj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CF168_14090
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CF168_14090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbj03021]
    CF168_14090
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:sbj02035]
    CF168_14090
Transcription machinery [BR:sbj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CF168_14090
Bacterial motility proteins [BR:sbj02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CF168_14090
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23 HTH_10 Ketoacyl-synt_2
Other DBs
NCBI-ProteinID: ASK69894
UniProt: A0A220UNU5
Position
complement(3244691..3245404)
AA seq 237 aa
MNKAAAYTCLDSKTSIVEQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEASSKFD
GGKGAKFETFAGIRIRGAMLDEIRRGDWVPRSVHRNNRRVAQAIDELEQVLGRDARDTEI
AEKLDMTLDEYHHILNDVSVGKIIGIEDLGVSQDILTSSDNVSDGTYEALAETQFHSALV
EAIKLLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQILSQAMLRLKGKLKHWT
NT seq 714 nt   +upstreamnt  +downstreamnt
gtgaataaagccgcagcgtatacttgtttagacagtaaaacgtcaatcgttgaacagtat
gcaccgttggttaaaagaattgcacatcacttgctcgccagattacctgcctcagtgcag
ctcgatgacttgcttcaagcggggatgatggggttattagaagcatcatccaagtttgat
ggtggcaaaggtgcaaagtttgaaaccttcgccggcatacggatccgtggcgccatgttg
gatgagatccgtcgtggcgactgggttccccgttctgttcatcgaaataatcgtcgagta
gctcaagccattgatgagttagagcaagtgttgggtcgtgatgcacgcgacacagaaatt
gcagaaaaacttgatatgacgctcgatgagtaccatcatattcttaacgatgtttctgtt
ggtaaaatcatagggatagaagacttaggcgtatcgcaggatatactcacttcgagcgat
aatgtcagtgatggtacatatgaagcgttagcagaaacccagtttcattcagcactagtt
gaggcgataaaattattgcccgaaagagatgcgctagtgctatcgttatactacgatgaa
gcattgaatttaaaagaaattggcgccattcttgaggtaagtgaatcgcgagttagccag
atattaagtcaggcaatgttgcggctcaaaggcaaactcaagcattggacataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (11)   

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