KEGG   Struthio camelus australis (South African ostrich): 104142203
Entry
104142203         CDS       T08512                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam04010  MAPK signaling pathway
scam04020  Calcium signaling pathway
scam04510  Focal adhesion
scam04518  Integrin signaling
scam04519  Cadherin signaling
scam04540  Gap junction
scam04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:scam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104142203 (PDGFRB)
   04020 Calcium signaling pathway
    104142203 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    104142203 (PDGFRB)
   04519 Cadherin signaling
    104142203 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104142203 (PDGFRB)
   04540 Gap junction
    104142203 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    104142203 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:scam01001]
    104142203 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:scam04090]
    104142203 (PDGFRB)
Enzymes [BR:scam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     104142203 (PDGFRB)
Protein kinases [BR:scam01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   104142203 (PDGFRB)
CD molecules [BR:scam04090]
 Proteins
  104142203 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 BACON_2
Other DBs
NCBI-GeneID: 104142203
NCBI-ProteinID: XP_009670330
Ensembl: ENSSCUG00000002926
Position
Unknown
AA seq 1092 aa
MLCTLLKATLGLLFLTGLLEVTSGSSRLHIEPGDAEIVLSLHSTFSLVCYGDGMLVWERE
GQTLPASLEHKDGVFISNLTLWNVTGRQTGEYMCTYSPDQAPEPTERKAVYIYVPDPSLV
FLPTAAEELFIFITGYTEAIIPCRVTNPQMQVTLYEKKVENPILAAYDPQQGFKGFFEDK
TYFCRTTVDDQDVDSDTFYVYRIQVSSVNVSISAVQTIVRQGENITLMCTVSGNELVNFN
WAYPRKKAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYICNVSEGYHEKTDRKDI
TVHVIERGFVRFHTRLASTEYAEVHKSRTIQVEVEAYPPPSIMWLKNNKTLTMESNSEFT
ISSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDEMQELSFHLQINVPAKVVDLRENS
SASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNDSAEIGLQTNATYHAE
LQVYRVNSALQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVLT
VISLVILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGRT
LGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIV
NLLGACTKGGPIYIITEYCRYGDLVDYLHHNKHTFLQSYSEKARREAEVYGNTTKEDHVQ
SHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDTYSPSAPER
TDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDF
GLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP
ELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVDC
YRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNARPAPSSPTSSILYTAVHQNGGENDYII
PLPDPKPEGTCDLPQEASISRASSMLNEVNTSSTISCDSPLGPRQDEEQEFDSQPVCQEP
NAGHHEVEESFL
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgctgtgcaccttgctgaaggcaaccctcgggctcctcttcctcactggtctgctggag
gtaacatccgggagcagcaggctgcacatcgaacctggagatgctgagatcgtccttagc
ctccacagcaccttctccctcgtgtgctatggggatggcatgctggtctgggaacgggaa
ggtcagactctccccgcctcgctggaacacaaggatggtgttttcatcagcaatctcacc
ctctggaatgtgacgggccgtcaaacgggggagtatatgtgcacctacagccctgaccag
gctccagagccaacagagaggaaggctgtttacatctatgttccggatccctccctagtc
ttcctccccacagctgccgaagagctcttcatcttcatcacgggctacacggaggccatc
atcccgtgccgtgtgaccaacccacagatgcaggtgaccctctatgagaagaaggtggag
aaccccatcctagctgcttatgacccacagcagggcttcaaaggcttctttgaggacaag
acctacttctgccggacaactgtggatgaccaggacgtggattcagacacgttctatgta
tacaggatccaggtttcctccgtgaatgtctccatcagcgcggtgcagaccattgtgagg
cagggagagaacattaccctgatgtgcactgtgagcggcaatgagctggtcaacttcaac
tgggcttatcctcgcaagaaggcagggaaggctgtggagccagtgactgacttcctgccc
ggatccacccacgaaatccgctccatcctcatcatccagaatgcagagttggaagatagt
gggacctacatctgcaacgtctcggagggctaccacgagaaaacggaccggaaagatatc
acagtccatgtcattgagcgtggctttgtgcgcttccacactcgcctggccagcacagag
tacgctgaggtccataagagccgcaccatccaggtggaggttgaggcctacccaccacca
agcatcatgtggctgaagaacaacaagacactgaccatggagagcaacagcgagttcacc
atctccagcaggaacctctcagaaaccaggtaccaaacagctctggttctggtgcgagtg
aagcaggaagaaggagggttttacaccatccgggcttccaacgaggatgagatgcaggag
ctgtccttccatctgcagataaatgtgccagccaaagtggtggatctcagggagaacagc
agtgccagcagtggggagcagactgtaacgtgctctgctgaaggaatgccacagccagag
atcagctggtccacctgcagcgacatcaaatggtgcagcaccaaggggcagcccacccgg
ctgctggggaacgactctgcagagatcggcctgcagaccaacgccacgtaccacgcagag
ctccaggtataccgcgtgaacagcgccctgcagctccacagggtggacgagcccctgctg
ctgagatgcaccgtgcaaaacttcctgggcacgaactcccaggacatcacgctggtccca
cacgccttgccatttaaagtggtcatcatctctgtcatcttggccttgctggtcctcacc
gtcatctccttggtaatcctcatcgttctgtggcagaagaaaccacgttatgaaatccgc
tggaaggtgattgagtcagtcagctccgatgggcacgagtacatctacgtggatcccatg
cagctcccttatgactccagctgggaggtgcccagggacaagctggtgttaggacgcacc
ctcggctctggtgcgtttggacgcgtggtggaggcaacagcccatggcttgagtcattca
cagtccaccatgaaagtggcagtcaaaatgctcaagtccactgccagaagcagcgagaag
caggccctcatgtccgagctgaagatcatgagccacctaggacctcacctgaacattgtc
aacttgctgggggcctgcaccaaaggagggcccatctatatcatcaccgagtactgccgc
tacggggacctggtggactacctgcaccacaacaagcacaccttcctgcagtcctacagt
gagaaagcccggcgagaggcggaggtgtacgggaacaccaccaaggaggaccacgtgcaa
agtcacctctccttgtctgttgagagcgatgggggctacatggacatgagcaaggacgac
tccctggattacgtgcccatgtctgatatgaagggtgaagtcaagtacgctgacattgag
tcctccaactacggcaccccatatgagctggacacctattccccatcagctcctgaaaga
acagaccgggtgacactgataaacgagtctccgcttctcagctacatggacttggtcggg
tttagcttccaggtggccaacgggatggagtttctggcttccaaaaattgcgtgcatcgt
gatctggctgcgaggaacgtcctcatctgcgaggggaagctggtgaagatctgtgacttt
ggcctggcgagggacatcatgagggattcaaactacatctccaaaggcagcactttcttg
ccccttaagtggatggccccagagagcatcttcaacaacctctacaccaccctgagtgat
gtgtggtcctttgggattctcctctgggagatattcactctgggagggactccataccct
gaactgcctatgaacgaacagttctacaatgccatcaaacgcggctatcggatgtccaaa
cccacccatgcctctgatgaaatctacgatatcatgcagaagtgctgggaggagaagttt
gagataagaccatccttctcacagctggtggtgcttatgggaaacctcttggtggattgc
tacagaaagaggtaccaacaggtggatgaagagttcatgaagagtgaccaccccgctgtt
gtccgcacaagacccacaatccctggactgaacaatgccaggcctgctcccagctccccc
accagcagcatcctctacacggctgtgcaccagaacgggggcgagaacgactatatcatc
ccccttcctgaccccaagcctgagggaacgtgtgacctccctcaggaggcctccatcagc
cgggccagctctatgctgaacgaggtgaacacatcgtctacgatatcctgtgacagcccc
ttgggcccacggcaggacgaggagcaggaattcgactctcagccggtctgccaggagccg
aacgcagggcaccacgaggtggaggagagtttcctgtag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (18)   

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