KEGG   Scyliorhinus canicula (smaller spotted catshark): 119950926
Entry
119950926         CDS       T11175                                 
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119950926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scau03019]
    119950926
Enzymes [BR:scau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     119950926
Messenger RNA biogenesis [BR:scau03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     119950926
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 119950926
NCBI-ProteinID: XP_038629820
Position
2:complement(14764496..14847716)
AA seq 763 aa
MPYPAANQGSLQPQSHKHYGITSPISLASPKENDYVLTQKLIEALKPFGVFEEEEELQHR
IAILGKLNSLVKEWIRDTSEIKNLPPSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHIERIDFFTSFCEKLKQQDEVRNLRAVEEAFVPVIKLSFDGIEIDILFARLALQTIPED
LDLRDDVLLKNLDLRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSASTRAVMMEEFKQGLSITDEILMGKMEWXQL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILISSLEKNEFITLAHVNPQSF
PAPKDNPEKDEFSTMWVIGIVFKKVENTENLSVDLTYDIQSFTDTVYRQAMNSKMFEADM
RIAAMHVKRKQLHLLLPSYIQQKKKKHSLEGNKANCEDENSMEASLDSDHSLLVPSSPLQ
NANSPQSPVTAALTTDAIGVQNSETQVESETSPSKRNSIPSSGGSSSSSSEHIPQASPIS
TSTAQPKSASTWALSTCVSNQSPSAATKTSTPVASGRKRPASPLTNEPTKKEKPATNGVT
MEQNSSQSLKKTSAQTSEVSPKRKKLDGSVPVKEQGDGSRSPVSETKLDENLKEVESEEK
LMPIPSKASASQEPTSTELSDVSSLPVNPVPVVKNSIKLRLNR
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgccataccctgctgcaaatcaaggatctctgcagccacagtcacacaaacattatggt
attacatctccaattagtttggcttcaccaaaagaaaatgattatgtgcttactcagaaa
ctcattgaagcattgaaaccttttggagtctttgaagaggaagaggagctgcagcacagg
attgcaattctgggaaaactaaatagcttggttaaggagtggattcgggataccagtgaa
attaagaaccttccaccttcagtaatagagaatgtcggtgggaaaatttttacatttggc
tcgtacagattaggagtgcatacaaaaggtgctgatattgatgccctatgtgtagcaccg
cgccacattgaaagaattgacttcttcacatccttctgtgaaaagttgaaacagcaagat
gaagtgaggaacttacgggctgttgaagaagcttttgtgccagtaattaaactatccttt
gacggtatagagattgatattttatttgcaagattggcacttcagacaatccctgaagat
ttggatctccgagatgatgtgctgcttaaaaacttggacttgagatgcattagaagtctt
aatggttgcagagtcaccgatgaaatattgcatttagtaccaaacattgaaaactttagg
ctgacgttgagagcaattaaattatgggcaaaacgccacaacatttactctaacattcta
ggctttctgggtggtgtgtcatgggccatgctggtggcaagaacatgccaactgtacccc
aatgctgttgcatccaccctagtacacaagttctttttggtattttcaaaatgggaatgg
cctaatcctgtcttgttaaagcaacccgaggactgcaatctgaatctaccggtgtgggat
ccccgggttaacccaagtgaccgataccatctcatgccaattatcacaccagcctaccca
caacaaaactctacttacaacgtctctgcatctacgcgtgcagtgatgatggaggagttt
aagcaaggtctttcgatcacagatgaaattttaatgggtaaaatggagttccaactcttt
gaagctccaaacttctttcagaagtacaagcattacattgtgctgctagcaagtgcccca
acggaaaaacagcatttagaatgggtgggtttggtggaatccaaaatccgaatcctgatt
agcagcttagaaaagaatgagttcattactctggctcacgttaatccacaatcattccca
gctcccaaagacaatcctgagaaggatgagttcagcacaatgtgggttattgggatagtg
tttaagaaagtggaaaacactgagaacctgagtgtcgacctgacttatgacattcagtca
ttcacagatactgtttatagacaagcaatgaacagcaaaatgtttgaagcagatatgagg
attgcagcaatgcacgtgaagaggaaacaacttcatctacttctacccagttatattcaa
caaaaaaagaaaaagcattcattggaggggaacaaagccaactgtgaagatgaaaatagc
atggaggcctctctggacagtgaccacagcctgctagtgccttctagtccattacagaat
gccaacagcccacagagtcctgttactgctgcattgacaacggatgcaatcggtgttcag
aattcagaaacccaggtggaatcagagactagtccttccaaaagaaattccattcccagc
tcggggggctcatcttcgtcatccagtgaacacattcctcaggcctctcccatatctact
tctactgcgcagccaaaatcagcaagcacctgggctttgtctacgtgtgtcagcaatcaa
tctccaagtgcagccacaaagacatccactcctgttgcctctgggagaaaaagaccggcg
tcaccacttacaaatgaacccacaaagaaggagaagcctgcaacgaatggtgtaacaatg
gagcaaaattcatcacaaagtttgaagaaaacatctgcacagacatctgaagtttcacca
aagagaaagaaactggatggatctgtccccgtgaaggaacagggtgacggttcaagaagt
ccagtcagtgaaacaaaattggatgaaaatcttaaggaagttgagtctgaagaaaagctg
atgccaatcccatccaaggcttctgcctcacaggaaccaacaagcacagaactttctgat
gtctcttcgcttcctgtaaaccctgttccagtagttaagaattcgataaagctgaggctg
aatcggtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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