KEGG   Saccharomyces cerevisiae (budding yeast): YBR079C
Entry
YBR079C           CDS       T00005                                 

Gene name
RPG1, TIF32
Definition
(RefSeq) translation initiation factor eIF3 core subunit A
  KO
K03254  translation initiation factor 3 subunit A
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YBR079C (RPG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:sce03012]
    YBR079C (RPG1)
Translation factors [BR:sce03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    YBR079C (RPG1)
SSDB
Motif
Pfam: PCI DUF6231
Other DBs
NCBI-GeneID: 852371
NCBI-ProteinID: NP_009635
SGD: S000000283
UniProt: P38249
Structure
PDB: 
4K51 4U1D 4U1C 3JAP

Position
II:complement(395383..398277)
AA seq 964 aa
MAPPPFRPENAIKRADELISVGEKQAALQSLHDFITARRIRWATPSTVEPVVFKFLEIGV
ELKKGKLLKDGLHQYKKLIQGSTEGLVSVGAVARKFIDLVESKIASEQTRADELQKQEID
DDLEGGVTPENLLISVYESDQSVAGFNDEAITSWLRFTWESYRAVLDLLRNNALLEITYS
GVVKKTMHFCLKYQRKNEFKRLAEMLRQHLDAANYQQSKSGNNLVDLSDADTLQRYLDQR
FQQVDVSVKLELWHEAYRSIEDVFHLMKISKRAPKPSTLANYYENLVKVFFVSGDPLLHT
TAWKKFYKLYSTNPRATEEEFKTYSSTIFLSAISTQLDEIPSIGYDPHLRMYRLLNLDAK
PTRKEMLQSIIEDESIYGKVDEELKELYDIIEVNFDVDTVKQQLENLLVKLSSKTYFSQY
IAPLRDVIMRRVFVAASQKFTTVSQSELYKLATLPAPLDLSAWDIEKSLLQAAVEDYVSI
TIDHESAKVTFAKDPFDIFASTASKEVSEEENTEPEVQEEKEETDEALGPQETEDGEEKE
EESDPVIIRNSYIHNKLLELSNVLHDVDSFNNASYMEKVRIARETLIKKNKDDLEKISKI
VDERVKRSQEQKQKHMEHAALHAEQDAEVRQQRILEEKAAIEAKLEEEAHRRLIEKKKRE
FEAIKEREITKMITEVNAKGHVYIDPNEAKSLDLDTIKQVIIAEVSKNKSELESRMEYAM
KKLDHTERALRKVELPLLQKEVDKLQETDTANYEAMKKKIVDAAKAEYEARMADRKNLVM
VYDDYLKFKEHVSGTKESELAAIRNQKKAELEAAKKARIEEVRKRRYEEAIARRKEEIAN
AERQKRAQELAEATRKQREIEEAAAKKSTPYSFRAGNREPPSTPSTLPKATVSPDKAKLD
MIAQKQREMEEAIEQRLAGRTAGGSSPATPATPATPATPTPSSGPKKMTMAEKLRAKRLA
KGGR
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggcccccccaccattccgtcctgaaaatgccattaagagagccgatgaacttatttct
gttggcgaaaaacaagctgctttacaatctttgcatgatttcataactgccagaagaatc
cgttgggctacaccttcaactgttgagccagtcgtgtttaaattcttggaaattggtgtt
gaactaaagaaaggtaagctgctaaaagacggtttgcaccagtacaaaaaattaattcaa
ggatctaccgaaggtttggtttctgtcggtgccgttgcacgtaaattcattgatttagtc
gaatctaaaatcgcttctgaacaaactagagctgacgaacttcaaaagcaagaaatcgat
gatgatttggaaggtggtgttaccccagaaaatttgctgatttctgtttacgagtcagat
caatctgtggctggtttcaatgatgaagccattacttcatggttaagatttacttgggaa
tcatatcgtgcagtcttagatttattgagaaacaacgctttgttggaaattacttattct
ggtgtcgttaaaaaaactatgcatttctgtttgaagtatcagcgtaaaaacgaattcaag
agattagctgaaatgttacgtcaacatttagatgctgctaactaccaacaaagtaaatca
ggaaacaatttagttgacttgagcgatgctgataccttgcaacgttatttagatcaacgt
ttccaacaagtcgatgtttctgtcaagttggaattgtggcacgaggcttatagatccatt
gaggatgttttccacttaatgaaaatatccaaacgtgctcctaaaccatctactttggct
aattactacgagaatctcgtaaaggtcttctttgtttccggtgatccattgttgcacact
actgcctggaagaagttttataagttatattctaccaatccaagagccacggaagaagaa
ttcaaaacatattcttctacaattttcctatccgctatttctacccaactagacgaaatt
ccatctattggctacgatcctcatttacgtatgtaccgtttattaaacttggacgccaag
ccaactagaaaggaaatgttgcaatccattattgaagacgaatccatttatggtaaagtt
gacgaggaattgaaagaattgtacgatatcattgaagttaactttgatgtcgacacagtg
aaacaacagctggaaaatttattagtcaaattgtcttctaaaacctacttcagccaatac
atcgcacctttaagagacgtcattatgagaagggtttttgttgctgcctctcaaaaattc
actactgtctcccagtccgaattatacaagctcgctaccctacctgctccgttagactta
tctgcttgggacatcgaaaaatcgctgttacaagctgctgtggaagattatgtttcaatt
accatcgatcatgaatctgctaaggttacattcgctaaagatccatttgacattttcgca
tcaactgcttctaaagaagtctctgaagaagaaaacacagagccagaagtccaagaagaa
aaggaggaaactgacgaagctcttgggccacaagaaactgaagacggtgaagaaaaggaa
gaagaatctgatcctgttattatccgcaattcttacatccacaacaagttgcttgaatta
tccaatgtcctacacgatgttgacagtttcaacaatgcttcatacatggaaaaggttaga
attgcccgtgaaactttaattaagaagaacaaggatgaccttgaaaagatttccaagatt
gttgacgaacgtgtcaagagatctcaagagcaaaagcaaaaacatatggaacatgctgcc
ctacatgctgaacaggatgctgaggtcagacaacagcgtattttggaagaaaaagctgct
attgaagctaaattggaagaagaggctcaccgtcgcttaattgaaaagaagaaacgtgaa
tttgaagctatcaaagaaagagaaatcacaaagatgattactgaggtgaatgctaaggga
catgtttacattgaccctaacgaagctaaaagcttagatcttgacaccattaaacaggtt
attatagctgaggtatcaaagaacaagagtgaattggaaagtcgtatggaatatgctatg
aagaagttagatcatacggaaagagctttgagaaaggtcgaattgccattgctgcaaaaa
gaagttgacaagctacaagaaacagacacagcaaattatgaagctatgaagaaaaaaatt
gtcgacgccgccaaggccgaatacgaagccagaatggctgatcgtaagaacttggtcatg
gtctatgatgattatttgaagttcaaggagcatgtttcgggcactaaggaaagcgaatta
gctgccatccgcaaccaaaagaaggctgaattggaagctgccaaaaaggccagaattgaa
gaagttcgtaagcgtcgttacgaggaagccattgcaaggcgtaaggaagaaattgcaaat
gctgaaagacagaagcgtgctcaagaactcgctgaggctacccgtaaacaaagagaaatc
gaagaagctgctgccaagaaatcaactccatactctttccgcgcaggaaacagggaacct
ccaagtacaccaagcactctaccaaaggcgaccgtttctccagataaagctaaattggat
atgatcgctcaaaaacaaagagaaatggaagaagccatcgaacagagactagccggtaga
acagctggtgggtcctccccagctactccagctactccagcaaccccagcaaccccaact
ccatcttctggtccaaagaaaatgactatggctgaaaagttgagagccaagagattggcc
aaggggggcaggtaa

KEGG   Saccharomyces cerevisiae (budding yeast): YDR429C
Entry
YDR429C           CDS       T00005                                 

Gene name
TIF35
Definition
(RefSeq) translation initiation factor eIF3 core subunit G
  KO
K03248  translation initiation factor 3 subunit G
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YDR429C (TIF35)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:sce03012]
    YDR429C (TIF35)
Translation factors [BR:sce03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    YDR429C (TIF35)
SSDB
Motif
Pfam: eIF3g RRM_1 PHM7_cyt zf-CCCH_7
Other DBs
NCBI-GeneID: 852039
NCBI-ProteinID: NP_010717
SGD: S000002837
UniProt: Q04067
Structure
PDB: 
4U1E 3JAP 3JAQ

Position
IV:complement(1324477..1325301)
AA seq 274 aa
MSEVAPEEIIENADGSRSIITYKIEDGVKYKITQKVKEVKVLEKVHKSVAERKNWHKYGS
EKGSPAGPSAVTARLGEEVELRLSRNWKQAEEERIQKEKASLTKTGLQCRLCGNDHMTMN
CPFKTILSELSALEDPATNEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGARDPSSDA
YRDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTF
SSEEVAEQALRFLDGRGYMNLILRVEWSKPKVKE
NT seq 825 nt   +upstreamnt  +downstreamnt
atgagtgaagttgcaccagaggagatcatagagaatgcagatggatctagatctatcatt
acatacaagattgaagacggtgtcaagtataagattactcagaaagtaaaagaggttaaa
gtattggaaaaagtccataaatctgttgcagaaagaaaaaactggcataaatatggctct
gaaaaagggtctccagcaggtccaagtgctgttacagcaagattgggtgaagaagtagaa
ttaagattgagtaggaactggaaacaagctgaagaagaaagaatacaaaaagaaaaggca
agtctcacaaagaccggtctacaatgtagattatgtggtaacgaccatatgaccatgaac
tgtccattcaagacaattttaagtgaactttcagcattagaagacccagccactaatgaa
ggcggtgtcgaggccgccagtgaagagaaggcaggccaagttggcggagctggttccatc
ccagggcagtatgttccaccttctcgtcgtgctggtgcaagagatccttcatccgatgct
tacagagactctagagaacgtgatgatatgtgtactttgaagattatgcaagttaatgaa
aatgccgatgaaaatagtttgagagaagagttattgttcccattcgcacccattccaaga
gtttctgtcgttagaaacaaagaaacaggtaaatcaagaggtctcgcctttgttaccttt
tcgagcgaagaagttgccgaacaagctttacgtttcttggatggtaggggttatatgaat
ttaattttacgtgttgaatggtccaaacctaaggttaaggaatag

KEGG   Saccharomyces cerevisiae (budding yeast): YLR192C
Entry
YLR192C           CDS       T00005                                 

Gene name
HCR1
Definition
(RefSeq) translation initiation factor eIF3 core subunit J
  KO
K03245  translation initiation factor 3 subunit J
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YLR192C (HCR1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YLR192C (HCR1)
   03012 Translation factors [BR:sce03012]
    YLR192C (HCR1)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    YLR192C (HCR1)
Translation factors [BR:sce03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    YLR192C (HCR1)
SSDB
Motif
Pfam: eIF3_subunit
Other DBs
NCBI-GeneID: 850889
NCBI-ProteinID: NP_013293
SGD: S000004182
UniProt: Q05775
Position
XII:complement(538792..539589)
AA seq 265 aa
MSWDDEAINGSMGNDDAVLMDSWDAEIGDDEPVMQSWDAEEEEKKPAPKPKKEQPKKVKK
GKESSADRALLDIDTLDEKTRKELIKKAEMESDLNNAADLFAGLGVAEEHPRARALQKEQ
EEQALKRPAFTKDTPIETHPLFNAETKREYQDLRKALTAAITPMNKKSPLNYSSSLAIDL
IRDVAKPMSIESIRQTVATLNVLIKDKEREERQARLARVRGGTATGGAGKKKVKGKTNLG
GAFKKDQDFDLDGPDDFEFGDDDFM
NT seq 798 nt   +upstreamnt  +downstreamnt
atgtcttgggacgacgaagctatcaatggttctatgggtaatgatgacgccgttttgatg
gactcatgggatgctgaaattggtgatgacgaacctgtcatgcaatcatgggatgcagaa
gaggaagaaaagaagcctgccccaaagccaaaaaaagaacaaccaaaaaaggttaaaaaa
gggaaagaatcctccgctgacagagccctattggatattgacacattggatgaaaagaca
cgtaaagaattaatcaaaaaggctgaaatggagtctgacttaaacaatgctgcagatttg
tttgcgggtttaggtgttgccgaagaacatccaagggctcgtgctttacaaaaggaacaa
gaggaacaagctctaaaaagacccgcctttaccaaggacacacctatcgaaacacatcct
ttgtttaacgccgaaacaaagagagagtaccaggatttaagaaaggctcttactgctgct
attacaccaatgaacaaaaaatctccgctgaactactcctcatcgttagcgattgatttg
attagagatgtagcaaaaccaatgtccatcgaatctataagacaaacagttgctactttg
aacgttttgatcaaagataaggaaagagaggagaggcaagctcgtctggcccgtgttaga
ggtggtactgctactgggggtgctggtaagaagaaagtcaaaggtaagaccaatttgggt
ggcgcatttaagaaagatcaagatttcgacctagatggccccgacgattttgaattcggt
gatgacgactttatgtaa

KEGG   Saccharomyces cerevisiae (budding yeast): YMR146C
Entry
YMR146C           CDS       T00005                                 

Gene name
TIF34
Definition
(RefSeq) translation initiation factor eIF3 subunit I
  KO
K03246  translation initiation factor 3 subunit I
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YMR146C (TIF34)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:sce03012]
    YMR146C (TIF34)
Translation factors [BR:sce03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    YMR146C (TIF34)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A Nup160 Urotensin_II
Other DBs
NCBI-GeneID: 855177
NCBI-ProteinID: NP_013866
SGD: S000004754
UniProt: P40217
Structure
PDB: 
4U1E 3ZWL 3JAP 3JAQ

Position
XIII:complement(557481..558524)
AA seq 347 aa
MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV
DCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPG
SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKY
DVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL
NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVA
ISPQGTSYASGGEDGFIRLHHFEKSYFDFKYDVEKAAEAKEHMQEAN
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgaaggctatcaaattaacaggtcatgaacgtccattaactcaagtgaagtacaacaaa
gaaggtgatttactattttcatgttcgaaagatagctcggccagtgtttggtattcgttg
aacggtgaaagattaggtactttggatggtcacaccggtaccatttggtctatcgacgtc
gactgtttcaccaagtactgtgttacaggaagtgctgattacagtatcaaattatgggat
gtgtcaaacgggcaatgtgttgctacatggaaatcgcctgtccccgttaaaagagttgaa
ttttccccatgcggtaactactttctagctatcttggacaacgtcatgaaaaatccaggt
tccattaacatatacgaaattgaaagagattccgccactcacgaattaacaaaggtctcc
gaagagccaatccataaaattatcactcatgaaggtttagacgctgccaccgtggctgga
tggtcgactaagggcaaatacatcattgcaggccataaagacggtaagatcagcaaatac
gatgtgtccaacaactacgaatacgtggattccatcgatttgcacgaaaagtccatcagt
gacatgcaattttctcctgatttaacatactttattacatcatccagagatactaactcg
ttcttggtcgatgtatcgactctacaagttcttaagaaatacgaaacagactgtcctcta
aacaccgccgtaatcaccccattgaaggaattcattattcttggtggtggtcaagaggcc
aaggatgtcaccaccaccagtgccaacgaaggtaagtttgaagctaggttctaccacaag
atcttcgaagaagaaatcggcagagtacaaggccattttggtcccttgaacacagttgcc
attagcccacagggcacaagttatgcctccggtggtgaagatgggttcatacgtctacac
catttcgaaaaatcttactttgatttcaaatacgacgtggagaaggccgccgaagctaaa
gagcacatgcaagaagctaattaa

KEGG   Saccharomyces cerevisiae (budding yeast): YMR309C
Entry
YMR309C           CDS       T00005                                 

Gene name
NIP1
Definition
(RefSeq) translation initiation factor eIF3 core subunit C
  KO
K03252  translation initiation factor 3 subunit C
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YMR309C (NIP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:sce03012]
    YMR309C (NIP1)
Translation factors [BR:sce03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    YMR309C (NIP1)
SSDB
Motif
Pfam: eIF-3c_N PCI
Other DBs
NCBI-GeneID: 855357
NCBI-ProteinID: NP_014040
SGD: S000004926
UniProt: P32497
Structure
PDB: 
4U1C 3JAP 5H7U

Position
XIII:complement(892988..895426)
AA seq 812 aa
MSRFFSSNYEYDVASSSSEEDLLSSSEEDLLSSSSSESELDQESDDSFFNESESESEADV
DSDDSDAKPYGPDWFKKSEFRKQGGGSNKFLKSSNYDSSDEESDEEDGKKVVKSAKEKLL
DEMQDVYNKISQAENSDDWLTISNEFDLISRLLVRAQQQNWGTPNIFIKVVAQVEDAVNN
TQQADLKNKAVARAYNTTKQRVKKVSRENEDSMAKFRNDPESFDKEPTADLDISANGFTI
SSSQGNDQAVQEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLI
PSRFDASANLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSD
GVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQLYFEATLK
DEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNIIPAQFKSKFTSKDQLDSADYVD
NLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQ
ILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADE
RARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYD
KLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVE
SLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQSVIAELEIPAKLNDEKTIFVVEK
GDEITKLEEAMVKLNKEYKIAKERLNPPSNRR
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgtcccgtttcttttcgtctaattacgaatacgatgtagccagttcttcatccgaagaa
gatcttttatcttcgtctgaagaagatttgttaagctcttcctcctctgagtctgaattg
gaccaagaatctgacgactcctttttcaatgaaagtgaaagtgaaagtgaagctgatgta
gactctgatgattctgatgcaaagccttatggtcctgactggttcaagaaatctgagttc
agaaaacaaggtggaggttcaaataaatttttgaaaagctctaactatgattccagtgat
gaagaatccgatgaagaagatggcaagaaggtagtcaagtctgccaaagaaaaactattg
gatgaaatgcaagacgtttataataagatctctcaagctgagaactctgatgactggttg
actatttctaatgagtttgatttgatctcgcgtctcttagttagggctcaacaacaaaac
tgggggactccaaatattttcatcaaggttgttgcccaagtggaggacgctgtgaataat
acacaacaagctgatttgaagaataaagctgttgcaagagcttataacactacaaagcaa
agagtcaagaaagtttctagagaaaatgaagactcaatggctaaattcagaaatgatcct
gaatcatttgataaggaaccaaccgcagatttggatatttctgctaatggattcacaatt
tcttcgtctcaaggcaatgaccaagcggtacaagaagatttcttcactagattacaaaca
ataattgactcaagaggtaagaagactgtcaatcaacaatccttgatttctactttggag
gagttattaactgtagctgaaaaaccatatgaattcataatggcttatttgactttgatt
ccatcaagattcgatgcctcagctaacctatcttaccaaccaattgatcaatggaaatct
tcattcaacgatattagtaaattattgtctattttagaccagacaattgacacctaccaa
gttaatgaatttgctgatccaatcgatttcattgaagatgaacctaaagaagattctgat
ggtgtcaagaggattctgggttccattttctcatttgttgaaagattagatgacgaattc
atgaaatccctgttaaacatcgatcctcattccagtgattatttgatccgtttaagggat
gaacaatcaatctataatttgatcctaagaactcaattgtactttgaagcgactttgaaa
gatgaacacgacctagaaagagcattgacacgtccattcgtcaagagattggatcatatc
tactataaatccgaaaatttgataaaaattatggaaactgctgcttggaatatcatacct
gctcaattcaaatctaaatttacttcaaaagaccagctcgattctgctgattatgtcgac
aatttaatagacggattatcgacaatcttatccaagcaaaacaacattgctgttcaaaaa
cgtgctattttatacaacatttactacactgcattaaacaaagatttccaaactgctaaa
gatatgttactaacttcccaagttcaaacaaatatcaaccaattcgattcatccctacaa
attttattcaacagggttgttgttcaattgggtctatccgcctttaaattatgtttgatt
gaagaatgtcatcaaattttgaatgatcttctgtcaagttctcacttaagagaaattttg
ggccaacaatccctacacagaatatctctcaattctagtaacaatgcttcagctgatgag
cgtgctagacaatgtttgccatatcaccaacacatcaatctcgatttaatcgatgtcgtc
ttcttaacatgttccttattgatcgaaattccaagaatgactgccttctattccggtatt
aaggtcaagagaattccttactctccaaaatccattcgtcgttccttagaacattacgac
aagttaagtttccaaggtccaccagaaactttaagagattatgtcttgtttgctgccaaa
tcaatgcaaaaaggtaactggagagactctgttaaatacttaagagaaataaaatcttgg
gctttattaccaaacatggaaacggtgttgaatagtttaacggaaagagtacaagttgaa
tctttgaagacttatttcttttctttcaagaggttctattcaagtttttctgttgctaaa
ctagccgaattatttgatcttccagaaaataaggtggttgaagttttgcaatctgttatc
gcagaattggaaatcccagccaaattaaacgacgagaagaccatctttgttgtcgaaaag
ggtgatgaaattactaaattggaagaagcaatggtaaaattgaacaaagaatataaaatc
gctaaagaacgtcttaacccaccatcaaatcgtcgttga

KEGG   Saccharomyces cerevisiae (budding yeast): YOR361C
Entry
YOR361C           CDS       T00005                                 

Gene name
PRT1, CDC63, DNA26
Definition
(RefSeq) translation initiation factor eIF3 core subunit B
  KO
K03253  translation initiation factor 3 subunit B
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YOR361C (PRT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YOR361C (PRT1)
   03012 Translation factors [BR:sce03012]
    YOR361C (PRT1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     YOR361C (PRT1)
Translation factors [BR:sce03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    YOR361C (PRT1)
SSDB
Motif
Pfam: eIF2A RRM_1 Phage_TAC_8
Other DBs
NCBI-GeneID: 854543
NCBI-ProteinID: NP_015006
SGD: S000005888
UniProt: P06103
Structure
PDB: 

Position
XV:complement(1015361..1017652)
AA seq 763 aa
MKNFLPRTLKNIYELYFNNISVHSIVSRNTQLKRSKIIQMTTETFEDIKLEDIPVDDIDF
SDLEEQYKVTEEFNFDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEAT
GKTKGFLFVECGSMNDAKKIIKSFHGKRLDLKHRLFLYTMKDVERYNSDDFDTEFREPDM
PTFVPSSSLKSWLMDDKVRDQFVLQDDVKTSVFWNSMFNEEDSLVESRENWSTNYVRFSP
KGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTFSTEPIIVEEDNEF
SPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHD
ATKNFMPLEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWTPETNNSACTATIA
EVPRGRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHTKSGKTQFSNLQICRLTERDIPV
EKVELKDSVFEFGWEPHGNRFVTISVHEVADMNYAIPANTIRFYAPETKEKTDVIKRWSL
VKEIPKTFANTVSWSPAGRFVVVGALVGPNMRRSDLQFYDMDYPGEKNINDNNDVSASLK
DVAHPTYSAATNITWDPSGRYVTAWSSSLKHKVEHGYKIFNIAGNLVKEDIIAGFKNFAW
RPRPASILSNAERKKVRKNLREWSAQFEEQDAMEADTAMRDLILHQRELLKQWTEYREKI
GQEMEKSMNFKIFDVQPEDASDDFTTIEEIVEEVLEETKEKVE
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgaaaaattttcttccacgcacattgaaaaatatttacgaattatatttcaataacatc
tcagtacatagtatagtatctcgcaacacacagctcaaaaggtcaaagataattcaaatg
actaccgagactttcgaagacattaagctagaggacatccctgttgacgacattgatttt
tccgacctggaagaacaatacaaggtcactgaagaattcaatttcgatcagtacatcgtc
gttaatggtgccccagtcatcccatccgccaaagttcctgttttgaaaaaggctttgact
tctttgttttccaaagctggtaaagttgttaacatggaatttccaattgatgaagccact
ggtaagacgaaaggttttctcttcgtggaatgtggctcaatgaacgatgctaaaaaaatt
atcaagagtttccacggtaaaagactggatttaaaacatcgtttgtttctttatactatg
aaagatgttgaaagatataattctgacgactttgacaccgaattcagggagcctgatatg
cctacattcgttccatctagttccttaaaatcctggttaatggacgacaaagtgagagat
cagtttgtattacaagatgacgtgaagactagtgtgttctggaactctatgttcaatgaa
gaagattctttggtggaatctagagagaactggtctaccaattatgttagattctcccca
aagggtacctatttgttttcttaccatcaacagggtgtaactgcatggggtggtccaaac
ttcgatcgtttgagaagattctatcatccagatgtaagaaactcttccgtctctccgaat
gaaaagtacctggtcactttctccacggaaccaatcattgtagaagaagataacgaattc
tctccatttaccaagaaaaatgagggtcatcaattatgcatctgggacattgcttctggt
ctgttgatggcaactttcccagtgataaagagcccatatctgaaatggcctttagttaga
tggtcttataatgataaatattgtgctcgtatggttggagacagtttaatagttcacgat
gctactaaaaacttcatgccattagaagctaaggctttgaagccttctggtattagagat
ttctcatttgctccagaaggtgttaaattacaaccattcagaaacggtgacgagccttct
gttttattggcttattggactcctgagactaataattccgcttgtactgctaccattgct
gaagttcctcgcggtagagtgctaaaaaccgttaacttagttcaagtctccaacgtaact
ctgcactggcaaaaccaagctgagttcctgtgcttcaatgtcgaacgtcacacaaagtct
ggtaagactcaattcagtaatctacaaatttgtaggttgactgaaagagatataccagtt
gaaaaggttgaattgaaagatagtgtctttgaattcggttgggaaccccacggaaataga
tttgttacaatttctgttcatgaagtagctgatatgaattatgctatcccagcaaataca
atcagattttacgctccagaaactaaagaaaagactgacgtaattaaaagatggagcttg
gtcaaagaaattccaaaaacttttgccaacactgtttcttggtctccagcgggtagattt
gtggttgtaggtgctttagtgggtccaaacatgcgtagatcagacctacaattttacgat
atggactatccaggtgaaaagaatattaatgacaataatgatgtttcagcttctttgaaa
gatgttgctcatcctacctactctgcggctactaatatcacttgggatccatctggtaga
tacgttaccgcatggtcaagttctttgaaacacaaggtggagcatggttacaaaattttc
aatattgctggtaacttagttaaagaagacatcattgctggcttcaagaactttgcctgg
agaccaaggccagcttccattttgtctaacgccgaaaggaaaaaggttaggaaaaacttg
agggaatggtctgcccaattcgaagagcaagatgcaatggaagctgacaccgccatgaga
gatttgattctacaccaacgtgaattattgaagcaatggaccgaatatagagaaaaaatt
ggccaagaaatggaaaaatctatgaatttcaaaatctttgacgttcaaccagaagatgcc
agcgatgactttaccaccatcgaagagatagttgaagaagttttggaagaaacaaaggaa
aaggtcgaataa

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