KEGG   Saccharomyces cerevisiae (budding yeast): YGL097W
Entry
YGL097W           CDS       T00005                                 
Symbol
SRM1, MTR1, PRP20, TSM437
Name
(RefSeq) Ran guanyl-nucleotide exchange factor
  KO
K11493  regulator of chromosome condensation
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YGL097W (SRM1)
   03036 Chromosome and associated proteins [BR:sce03036]
    YGL097W (SRM1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     YGL097W (SRM1)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    YGL097W (SRM1)
SSDB
Motif
Pfam: WD40_RLD RCC1 RCC1_2 Alsin_RLD
Other DBs
NCBI-GeneID: 852782
NCBI-ProteinID: NP_011418
SGD: S000003065
UniProt: P21827
Structure
Position
VII:321782..323230
AA seq 482 aa
MVKRTVATNGDASGAHRAKKMSKTHASHIINAQEDYKHMYLSVQPLDIFCWGTGSMCELG
LGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDT
SNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCAL
FSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEG
MVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGL
NQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMF
EVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGF
GETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFSVSGGVKLSDEDAEKRADEM
DD
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggtcaaaagaacagtcgccaccaatggagacgcgtctggcgctcatagagcaaagaaa
atgtctaaaactcatgcttctcatatcataaacgctcaagaagactacaagcatatgtac
ttaagtgtccaaccattggatatattttgctggggtactggttctatgtgtgagcttggg
ttgggtccactagccaaaaataaggaagttaaaagaccaaggttaaacccatttttacct
cgcgatgaggccaagatcatttcttttgcagtcggtggtatgcacaccttagcccttgat
gaagaaagcaatgtatggtcctggggttgcaatgacgtgggtgcgttgggcagagatact
tccaacgccaaggaacaactcaaggacatggacgccgatgactcaagtgatgacgaagat
ggtgatttgaacgaattggaatctacgcccgctaaaatcccaagagagtcatttcctccc
ttagcggagggacacaaggtcgtgcaattggcagctacagacaatatgagttgcgccctg
ttcagcaatggcgaggtatacgcatggggtactttccgttgcaatgaaggtatcctaggg
ttttaccaagataaaattaaaattcaaaaaactccatggaaagtgcctacattctctaag
tacaatattgtccaattagctcccggtaaggatcacatacttttcttagatgaagagggt
atggtgttcgcctggggtaacggtcagcaaaaccaattaggaagaaaagttatggaaagg
ttccgtttaaagactttggatcccagaccatttgggttaagacatgtaaaatacatcgca
tctggcgaaaaccattgctttgctttaacaaaagacaacaagttagtaagctgggggttg
aatcagtttggtcaatgtggtgtttcagaggatgtggaagacggtgcgcttgttacaaag
ccaaaaagactagcgctacctgataacgttgttatcagaagcattgctgctggtgaacat
cactcattgatcctatcccaagatggcgatttgtattcgtgtggtagactagacatgttt
gaagttggtatcccaaaagacaatttacccgaatatacttacaaagatgttcatggaaaa
gcacgtgccgtgccacttccaactaagttgaataatgttccgaagttcaaaagcgttgcg
gcggggtctcaccattcagtcgcggtagctcaaaatggcattgcctattcttggggtttt
ggtgaaacctacgccgttggattaggcccttttgaggacgacactgaagttccaaccaga
atcaagaatactgctacacaggatcataacatcattttagtcgggtgtggaggccaattt
tccgtgtctggtggtgttaagctgtctgatgaggacgcagaaaagagagcggatgaaatg
gatgattaa

  All links  
Gene (11)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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