KEGG   Saccharomyces cerevisiae (budding yeast): YIL079C
Entry
YIL079C           CDS       T00005                                 
Symbol
AIR1
Name
(RefSeq) TRAMP complex RNA-binding subunit
  KO
K12597  protein AIR1/2
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YIL079C (AIR1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YIL079C (AIR1)
   03016 Transfer RNA biogenesis [BR:sce03016]
    YIL079C (AIR1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     YIL079C (AIR1)
Transfer RNA biogenesis [BR:sce03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    YIL079C (AIR1)
SSDB
Motif
Pfam: AIR2-like_ZnK4 zf-CCHC DUF8363 MDH1B_N SLU7_N
Other DBs
NCBI-GeneID: 854731
NCBI-ProteinID: NP_012186
SGD: S000001341
UniProt: P40507
Position
IX:complement(210923..212005)
AA seq 360 aa
MSTLLSEVESIDTLPYVKDTTPTGSDSSSFNKLLAPSIEDVDANPEELRTLRGQGRYFGI
TDYDSNGAIMEAEPKCNNCSQRGHLKRNCPHVICTYCGFMDDHYSQHCPKAIICTNCNAN
GHYKSQCPHKWKKVFCTLCNSKRHSRERCPSIWRSYLLKTKDANQGDFDFQTVFCYNCGN
AGHFGDDCAERRSSRVPNTDGSAFCGDNLATKFKQHYFNQLKDYKREASQRQHFDNEHEF
NLLDYEYNDDAYDLPGSRTYRDKMKWKGKVQSTRNKNSSNNRYESSNNRKKKSPFSAQNY
KVTKNKRVQTHPLDFPRSSQNNRTNDYSSQFSYNRDDFPKGPKNKRGRSSSNKSQRNGRY
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtcgacattgttatctgaggtagaaagtatcgatactttgccgtatgtgaaggataca
acaccgacaggaagtgactcgtcatcatttaataaattattggctccttccatagaggat
gtagatgctaacccagaggaactgaggactttacgtggccaaggacggtattttggaata
acagattatgactcaaacggtgcgataatggaggcagagccaaagtgtaataattgttcg
caaagaggtcatttgaaaaggaattgtccccatgtgatatgtacttactgcgggtttatg
gatgatcattactcacaacactgccctaaggctattatttgcactaattgtaatgcaaac
ggccattataaatcacagtgtcctcataaatggaagaaggtgttctgcacgctttgcaat
agcaaaagacactcaagagaaagatgtcctagtatttggagatcttatttattaaaaaca
aaagatgctaaccaaggtgacttcgattttcaaacagttttctgttataactgtgggaat
gccggtcattttggcgatgactgtgctgaaagaaggtcatcgagagtgccgaacactgat
ggaagtgcattttgcggtgataacttagccacaaaatttaaacaacactattttaaccaa
ttgaaagactataaacgtgaagcttcacaaaggcaacactttgataacgaacatgaattc
aacctgcttgactatgaatataacgacgatgcatacgacctccctggctcaaggacttat
agagataaaatgaaatggaagggcaaagtgcagtcaacaaggaacaaaaatagtagcaat
aatagatatgaaagcagtaataacaggaagaagaagtcaccatttagcgcacagaactac
aaagtgacgaaaaataaaagagttcagacacaccccttagatttccccagaagtagccaa
aacaacagaacgaacgattattcgagccagttcagctataatagggacgacttccccaag
ggtcctaagaataagaggggccgatcatcttctaacaaaagccaaagaaatggccgttat
tga

  All links  
Gene (32)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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