KEGG   Saccharomyces cerevisiae (budding yeast): YJL041W
Entry
YJL041W           CDS       T00005                                 

Gene name
NSP1
Definition
(RefSeq) FG-nucleoporin NSP1
  KO
K14306  nuclear pore complex protein Nup62
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YJL041W (NSP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YJL041W (NSP1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     YJL041W (NSP1)
SSDB
Motif
Pfam: Nsp1_C WXG100 DUF16
Other DBs
NCBI-GeneID: 853409
NCBI-ProteinID: NP_012494
SGD: S000003577
UniProt: P14907
Structure
PDB: 
1O6O

Position
X:join(365784,365903..368373)
AA seq 823 aa
MNFNTPQQNKTPFSFGTANNNSNTTNQNSSTGAGAFGTGQSTFGFNNSAPNNTNNANSSI
TPAFGSNNTGNTAFGNSNPTSNVFGSNNSTTNTFGSNSAGTSLFGSSSAQQTKSNGTAGG
NTFGSSSLFNNSTNSNTTKPAFGGLNFGGGNNTTPSSTGNANTSNNLFGATANANKPAFS
FGATTNDDKKTEPDKPAFSFNSSVGNKTDAQAPTTGFSFGSQLGGNKTVNEAAKPSLSFG
SGSAGANPAGASQPEPTTNEPAKPALSFGTATSDNKTTNTTPSFSFGAKSDENKAGATSK
PAFSFGAKPEEKKDDNSSKPAFSFGAKSNEDKQDGTAKPAFSFGAKPAEKNNNETSKPAF
SFGAKSDEKKDGDASKPAFSFGAKPDENKASATSKPAFSFGAKPEEKKDDNSSKPAFSFG
AKSNEDKQDGTAKPAFSFGAKPAEKNNNETSKPAFSFGAKSDEKKDGDASKPAFSFGAKS
DEKKDSDSSKPAFSFGTKSNEKKDSGSSKPAFSFGAKPDEKKNDEVSKPAFSFGAKANEK
KESDESKSAFSFGSKPTGKEEGDGAKAAISFGAKPEEQKSSDTSKPAFTFGAQKDNEKKT
EESSTGKSTADVKSSDSLKLNSKPVELKPVSLDNKTLDDLVTKWTNQLTESASHFEQYTK
KINSWDQVLVKGGEQISQLYSDAVMAEHSQNKIDQSLQYIERQQDELENFLDNFETKTEA
LLSDVVSTSSGAAANNNDQKRQQAYKTAQTLDENLNSLSSNLSSLIVEINNVSNTFNKTT
NIDINNEDENIQLIKILNSHFDALRSLDDNSTSLEKQINSIKK
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgaacttcaatacacctcaacaaaacaaaacgcccttttcgttcgggactgccaacaat
aactctaacaccaccaatcagaattcctctactggtgcgggcgccttcggaacaggtcaa
tcaacatttggtttcaacaattctgcgccaaataacacgaacaatgcaaactcttcaatc
acacctgcatttggtagcaataacactggtaatactgcattcggtaacagtaaccccaca
agtaacgtttttggcagcaacaattctacgactaatacatttggtagtaatagtgcaggg
acatccctttttggatcttccagtgctcaacaaacgaagagcaatggaactgctggagga
aatacatttggttcttcatccttattcaataacagtactaatagcaatacgacaaaacct
gcgttcggcggtttgaattttggcggcggcaataacacaactcctagctcgaccggtaat
gctaacacaagtaataacttatttggcgctaccgcaaatgcgaataagccagccttttcc
tttggtgcaaccactaacgacgataaaaaaacagaaccagacaagcctgctttctccttt
aattcaagtgtcggtaataagacagacgctcaagctcccactacaggattttcctttggt
tcacaactaggtggaaacaaaacggttaacgaggctgcaaagccttccctttcatttggt
tcaggatcagctggtgctaacccagctggagcttcgcaacccgaacctacaactaatgaa
ccagcaaaaccagccctctcttttggtactgcaacatccgacaataagacaactaacaca
accccaagtttttcgtttggtgctaaatcggatgaaaataaagctggtgctacttctaag
cctgccttctcattcggtgctaagccagaagaaaagaaggatgataattcctcaaaacca
gctttctcatttggtgccaaatcaaatgaagacaagcaagatggaacggctaagccagca
ttttcctttggtgccaagcccgcggagaagaataacaatgaaacctccaagccggcattc
tcttttggagcaaagtctgatgagaaaaaggatggtgatgcctctaaacctgccttctct
tttggcgctaaaccggatgaaaataaagctagtgctacttctaagcctgccttctcattc
ggcgctaagccagaagaaaagaaggatgataattcctcaaaaccagctttctcatttggt
gccaaatcaaatgaagacaagcaagatggaacggctaagccagcattttcctttggtgcc
aagcccgcggaaaagaataacaatgaaacttccaagccggcattctcttttggagcaaag
tccgatgagaaaaaggatggcgatgcctctaaacctgccttctcatttggtgctaaatcg
gatgaaaaaaaggacagtgattcttcgaagcctgccttctcatttggtactaaatcgaat
gaaaaaaaggacagtggttcttcgaagcctgccttctcattcggtgctaaacccgatgaa
aagaagaatgatgaagtctccaagcctgccttctcattcggagcaaaggctaacgaaaag
aaagaaagtgatgaatcaaaatcagccttttcatttggttctaagcctacaggaaaggag
gaaggcgatggggcgaaggctgccatttcctttggtgctaaacccgaagaacagaaatcc
agtgatacgagcaagccagcgtttacttttggtgctcaaaaagataatgagaagaaaaca
gaggaatcttctacggggaagtcaaccgcagatgtcaaatcaagtgatagcttgaaatta
aattctaaaccagtagaattgaagccagtttctctcgacaataaaacactggacgattta
gtaacgaaatggactaaccaactaacagaatcggcctctcattttgaacagtataccaaa
aaaattaatagttgggatcaggtactagtgaaaggaggtgaacaaattagtcagttatac
tcagatgctgtgatggcggaacatagtcaaaacaaaatagatcaatctctacaatatatc
gagaggcaacaggatgaattagaaaacttcttagacaattttgaaaccaagacagaggca
cttctgtccgatgttgtgtctacaagttcaggtgctgcggccaacaataatgaccaaaaa
agacaacaggcctataagacagcccagactttggacgaaaatttaaactcgttgtcatcc
aatctttcttctctaatagtagaaatcaacaatgttagtaatacattcaacaaaaccact
aacatcgatataaacaatgaagacgaaaatattcaactaatcaaaatcttgaattcacat
ttcgacgctttaaggtcactagacgataactccacctctctggaaaaacaaatcaactcg
ataaagaaatga

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