KEGG   Saccharomyces cerevisiae (budding yeast): YML031W
Entry
YML031W           CDS       T00005                                 

Gene name
NDC1
Definition
(RefSeq) Ndc1p
  KO
K14315  nucleoporin NDC1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  RNA transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    YML031W (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YML031W (NDC1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     YML031W (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 854977
NCBI-ProteinID: NP_013681
SGD: S000004493
UniProt: P32500
Position
XIII:214189..216156
AA seq 655 aa
MIQTPRELLNPRYTYHTIFSDVCKTRFNHLVTRLFFICSIIQTVVISLLALPHSPLWELA
LAFIPNILALNLVSLLIIVTRKNYMHVKNFGFANSLTFILGQLLSVKFLVYQGVYSMGSI
LLSFVLGVVFGRGGSGWKPYYKLFIWLVVPTIYNLQHHVTDADKLSFNCENFFQAPQDYV
LERVKRIMEKSVILSVISMFVLPIFTTVFFSRQKSGLFDSFTNGVLAVTNLLIISCIIFI
TFEFINIAFDAHMSIGCLHKGKLISNLSSTPMETLLSGLSADKPFTRLTAYQELAYRATS
LDPSLRAPIYHSKFRSSSGNTWSLILNECLKTIQINNEKVVQYLRSVQDLGGSATARHKK
KVENLDYMYENGKLTSANERLFGNRPSMMAPLRDNGLLDESPNRLRVRTDDSVLLNRGNK
KRHRSSYYDNDLDETTQTFNGSIFTHETTFMTAMRLMLKKLKNSIMSFIFPSYAERQSSD
ESDNYRLLPNGSNKAQISIIDIWSISKKRQAEKLVPLPICHANSVVALTGLLIRSKTEDP
KGGIIASVGDILKTLERSICALGEFADWDPESMAYTAFQTQRTAQDRVQQDSEDEDSMKD
TTDMISVLYQLSTSAFMEIVLEYNVALNDVYLDADVAKLANWFLEVYASGNPNAT
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgatacagacgccaagggagttgttgaatccacggtacacgtaccataccatctttagc
gacgtgtgcaagacccgattcaaccatttagttacgaggttgtttttcatatgttctatt
atccaaactgtggtgatttcactgctggcgttgccacactcaccgttatgggaactggca
ttggcatttattcccaatattttagctcttaacctagtttcccttttgatcattgtgaca
agaaaaaattacatgcatgtaaagaattttgggttcgctaattcacttactttcattcta
ggccaattgttatcagtaaagtttcttgtataccagggagtctatagcatgggcagcatc
cttttatcattcgtactgggtgtggttttcggacgtggcggatctggatggaagccatac
tataagctgtttatttggctagtcgttcccacgatttacaacctacaacatcatgtcact
gacgctgacaaattgtcgttcaactgcgaaaactttttccaggccccacaagactacgta
ttagagcgtgtcaagaggattatggagaagtcagtcattctaagtgtaatcagcatgttc
gtattaccaatctttaccacagtatttttttccaggcaaaaatcgggattatttgattca
tttacgaatggcgtgctagctgtcacaaatttactaataatctcctgcattatcttcatc
actttcgaattcataaatatagcatttgacgcacatatgtccataggttgtctgcacaag
ggcaagctaatttcgaatttgtcgtcgacgccgatggaaaccctgcttagtgggctttct
gcagacaagccatttactaggttgactgcctaccaggaactagcgtatagggccacttca
ctggatccatcattgcgagcaccaatatatcactccaagttcagaagcagtagtggtaat
acttggtcattaatcctcaatgaatgcttgaagaccattcagataaacaatgaaaaggtt
gtgcagtacctaagatcagtacaagatcttgggggctctgcaactgctagacataaaaaa
aaagtagaaaatctagattatatgtatgagaacgggaaactaacaagcgccaacgaaaga
ctctttgggaaccgaccctctatgatggcgccattacgggataacggcttattagatgaa
tcaccaaacaggctgagggtaagaactgacgatagtgtattgcttaaccgcggaaacaag
aaaaggcataggtcctcgtattacgacaacgatttagatgaaacgacacaaacttttaac
ggctctattttcacccacgaaacaacatttatgaccgctatgcgtctgatgttaaaaaaa
ctgaaaaattctataatgtcgtttattttcccttcctacgcagaaagacaatcatctgat
gaaagcgacaattacagactattaccaaatggctccaacaaagcccaaatctcgataatt
gacatatggtccatttccaagaaaaggcaagctgagaagctggttccattgcccatatgc
cacgcaaatagtgtggtagcactgacaggactgctgatccgatcaaagacagaagatcca
aaaggcggtatcattgcatccgttggggatattcttaagactttggagaggtccatctgt
gcactgggtgaatttgccgattgggatccggaatcgatggcatacactgccttccaaaca
caaaggacagcccaagatagagtacaacaagacagtgaagacgaagatagcatgaaagac
actactgacatgatcagtgttctttatcagctgtccaccagtgcttttatggagattgta
cttgaatacaatgttgctctgaacgacgtatatttggatgcagacgtggccaagttggcg
aactggtttctagaagtgtacgcctcaggcaaccctaatgctacgtaa

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