KEGG   Siniperca chuatsi (mandarin fish): 122876079
Entry
122876079         CDS       T08948                                 
Symbol
tubb2b
Name
(RefSeq) tubulin beta-2b chain
  KO
K07375  tubulin beta
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04145  Phagocytosis
schu04517  IgSF CAM signaling
schu04540  Gap junction
schu04814  Motor proteins
schu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:schu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    122876079 (tubb2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    122876079 (tubb2b)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    122876079 (tubb2b)
  09142 Cell motility
   04814 Motor proteins
    122876079 (tubb2b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122876079 (tubb2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122876079 (tubb2b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:schu04812]
    122876079 (tubb2b)
   04147 Exosome [BR:schu04147]
    122876079 (tubb2b)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     122876079 (tubb2b)
Cytoskeleton proteins [BR:schu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    122876079 (tubb2b)
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122876079 (tubb2b)
  Exosomal proteins of colorectal cancer cells
   122876079 (tubb2b)
  Exosomal proteins of bladder cancer cells
   122876079 (tubb2b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 122876079
NCBI-ProteinID: XP_044051919
Position
LG5:complement(5888494..5891139)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaattgtgcatcttcaagccggccagtgcggaaaccagattggtgccaagttt
tgggaggtgatcagtgacgagcatggtattgacccaactggtacataccatggtgacagt
gacctgcagctggacaggatcaatgtctactataatgaagcttcaggtggtaaatacgtg
ccccgtgctgtgctagttgatctggagccaggcaccatggactctgtgaggtccggacct
ttcggccagatcttcagaccagacaactttgtttttggccaaagtggtgctggcaacaac
tgggccaagggtcactacacagagggtgcagagctggtggactctgtcctggatgtggtg
aggaaggaggcagagagctgtgactgcctgcagggcttccagctcacacactctttgggt
ggtggtacaggttctggtatgggcaccctgctcatcagcaagatccgtgaagagtacccc
gaccgcatcatgaacacgttcagcgtggtgccttccccaaaagtatctgacacagttgtt
gagccctacaacgccacactatcagtccaccagcttgtagaaaacacagacgagacatac
tgcatcgacaatgaagccctgtatgacatctgtttccgtaccctcaaactcacaaccccc
tcatatggtgacctcaaccacttggtctctgccaccatgagcggtgtcaccacctgcctc
aggttccccggacagctcaacgctgacctgcggaagctggctgtaaacatggtgccattc
ccccgtctgcacttcttcatgccaggctttgctcccctgacaagcagaggtagccagcag
tacagatcgctcactgtgccagagctcacccagcagatgtttgatgccaagaacatgatg
gctgcctgtgacccacgtcacggccgctacctgacagtggctgccatcttccgtggccgc
atgtccatgaaggaggtggacgagcagatgctgaacgtacagaacaagaacagcagctac
tttgttgaatggatccccaacaacgtcaagaccgctgtctgcgacattcctccccgtggc
ctcaagatggctgccaccttcattggcaacagcacagccatccaggagctgttcaaacgc
atctctgagcagttcacagctatgttcaggcgcaaagctttcctccactggtacactggc
gagggtatggatgagatggagttcacagaggcagagagcaacatgaatgacctggtgtct
gagtaccagcagtaccaggacgccactgctgaggaggagggagagtttgaggaagagggt
gaggaggagctggcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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