KEGG   Siniperca chuatsi (mandarin fish): 122876178
Entry
122876178         CDS       T08948                                 
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:schu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122876178 (rab11fip1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:schu04131]
    122876178 (rab11fip1a)
Membrane trafficking [BR:schu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    122876178 (rab11fip1a)
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 122876178
NCBI-ProteinID: XP_044052109
Position
LG5:14234597..14249917
AA seq 1280 aa
MSLADQSQQWFPTSVQVTVHQARSLRIKGKNGTNDAYAIIQVAKDKFSTSVAEKCVDPVW
KEEASFDLPLFHPGNAERCTLYVIVMHRAQVGLDKFLGQAVVNLLDLDDNNSHKKTDWFK
LVDKSGKEDKARGEVLLDVQFMRNNMSASMFDLSMQDKPRSRISKLKDKVRGKKKDGFSD
SASAIVPSVSQVLTDSETEADAQSLNQFPGAKKKSKLKTLFAPKSNLQRNISQSMSTLGT
PSEKNSSLSGSRSSGLNVDSPEVKKKFKFLGHKRTGSSDSKVSQGPFSLLGIKSKQSTSD
LNNLCINGSHVYTEEESKSGSTLSLNSSGQGSVEDVRKHTSDVSADSFKSVPVPSHSHES
TDRAVLEQQRHQEEEKRRQAEERRIAEAKRLEEEEKYRVEIKRLQEEEERRCKEEQERKR
RFLEDEARRKKQMEEEERRKQEEERRMLEAAENQRLEEERRRAEDQKRQEEASMSDRLSS
LFGMIRKKEEKKEEVQQHTKVELPTLAPHSDSRDPNQPISHHSTNPSEDIPLSLDPQVSR
NESPADQQKSSHNPQTSSAMVFLNRTAKVSAVKPRLAQSLVSEPAVCQTPSQSCPSPATS
ESTLSSVPSESPDTFSDLHLSLAPPNISQSPSGSPCGSIENLSCVGSSPTMADKKRRAPI
PPSNPVHETKTGGNHIFVREIKNPAYVEADGSQQGKNISLPLPDYETLFPQKRHGVQGHT
RWDHIIAEVNQRHRVTPPKFLGPEMSVDGPEEHEPSLRSSLQQESPVMRHYQTQPQETKP
MSTKKVAAPAPPKSVTPPPPRSVADSTQRPSQNIAHQSLMRPNPSAVPGPVNTDASSRES
LSVMSRDGARNVLHPSPAGTHAPRTSSHMDWDTTTPPNDQRKVQVPMNKEVPTAKPRQRV
SGKEPVQQENSAVTPVVSDKNLNSDIQTLSSSSMSRVDKTGRQTKENVADFDPFPSTELL
SKDPWAQLTQNPEADDIFTHSVQREQKLEVQRMTDDLDNIFSQEKPTDQFASFNGSDSDK
HSEYRQKDEDSKQVSPAFQRRYSQKRKQIVPSTTHSDKTSKSRQEPAYKEKTTLTKANQG
LSAKDVVNEPIALKLQADVKTPRNFYGGEDPFGTEPFAVTSASTPSEPLQEVMEEPASQA
GGLSGGKTLLQAWVSPSEFQPVSAQNSNGGGLALTPRRPHPVKPMSSVESQHPISTPALK
EIKVRDSTPGKIQVADSVQSGPYTQLTQEELITMVVKQQADLSRKDAKIVELEDYIDNLL
VRVIDEKPTILQSLNSAKPV
NT seq 3843 nt   +upstreamnt  +downstreamnt
atgtctctggccgaccagagccagcagtggttccctacgagtgtccaggtaacggtgcat
caggctcggagcctgcgtatcaagggcaaaaatggcaccaacgacgcctatgccatcatc
caggtggccaaagacaagttttccacctctgtggctgagaaatgtgtcgatccagtgtgg
aaagaagaggcttcgtttgacctgccactcttccacccgggcaacgctgaacgctgcaca
ctgtatgtcatagtaatgcaccgcgctcaagtggggctcgacaagttcttggggcaagct
gtggtaaacttactggatcttgatgacaacaactctcacaaaaagacagattggttcaaa
ctggtggacaagtctggaaaagaggacaaggcacgaggggaggttctgctagatgtccaa
tttatgagaaacaacatgtcagctagcatgtttgacctttctatgcaggacaaaccacgc
tcccgcatttccaagctgaaggacaaagtccgtgggaagaaaaaggatggcttctctgac
tctgcttcagctattgttccctctgtcagccaggtcctcacggacagtgagacggaggct
gatgcacagtcactcaatcagtttccaggagctaaaaagaaatctaagctcaaaacactc
tttgctcccaaatcaaacttgcagcgcaacatctcgcagtccatgtctactctggggact
ccttccgagaagaattcatctctcagtggcagccgctcgtctggcctcaatgtagactct
cctgaagttaaaaagaaattcaaattcctgggacacaagcgaacaggcagctctgatagc
aaggtgtctcagggtcctttctccctactaggaataaaatccaagcagagcaccagtgac
ctgaacaacctgtgcatcaacggcagccatgtgtacacagaggaggagtccaagagtgga
tctacgctcagtctgaacagctcaggccaagggtctgtggaggacgtccgcaaacacacc
tctgacgtctctgcagattccttcaaaagtgtgcctgttccctcccacagtcatgagtct
acagatagggcagtactggagcaacagcgccaccaagaggaggagaagagaaggcaggca
gaagaaaggcgcatagcagaagccaagaggctggaggaagaggagaaatacagggtagag
atcaagagactgcaggaggaagaggagcgcagatgcaaagaggaacaggagaggaagaga
cgctttcttgaagatgaagcaaggaggaagaaacagatggaggaggaggagaggagaaag
caagaggaagaacgcaggatgctggaagcagcagagaaccagaggcttgaggaggagcgt
cgtagagcagaggatcagaaacgacaggaggaagcctccatgagcgacaggctgtcatct
ctgtttggaatgatcagaaagaaggaggaaaaaaaagaggaggtacagcaacatactaaa
gtggagctacccacactggctccccacagtgactcaagagatccaaatcagcccatttcc
caccactccaccaacccgtctgaggacattcccctcagtttagatcctcaagttagcaga
aatgaaagcccagctgatcagcagaaatccagccacaacccacaaacctcctctgctatg
gtcttcctcaaccgcactgctaaagtgtctgcagtcaaacccagattggctcaatctctg
gtgtctgaacctgctgtctgccaaacccccagtcagtcgtgtccttccccagccacctct
gagtccaccctctctagtgtcccatctgagtcccctgatactttctccgacctccactta
tccctggctccaccaaacataagtcaaagcccatctggttccccttgtggcagcatagag
aatttgtcctgtgtgggatcttcacccaccatggcggataagaagagaagagcacccatt
ccaccttcaaatccagtacacgagaccaaaactggaggaaatcacatttttgtcagagag
atcaagaaccctgcatacgtagaggcagatggatcgcagcaaggcaaaaacatttctcta
ccacttcctgattatgaaaccctgtttcctcagaagagacacggagtgcaagggcacact
cgatgggaccacataatcgctgaggtcaatcagagacacagggtcactccacctaaattt
ctgggtccagagatgagtgtggatggtccagaggagcatgaacccagtcttaggtcttca
ctccaacaggagagtcctgttatgaggcattatcaaacacaacctcaggagaccaagcct
atgtcaacaaaaaaagtagccgctccagctccccctaaatcagtcacacctccaccccct
cgatcagtagcagattccactcaaagaccgagccaaaatattgctcaccaatctctcatg
aggcctaatccgtctgcagtcccaggacctgtaaacactgatgcttcaagcagagaaagt
ctctcagtaatgtccagggatggagcaaggaatgtgttacacccgtcacctgcaggaaca
catgcacccagaacatctagccatatggactgggatactacaacaccaccaaatgatcaa
agaaaagtgcaagtccctatgaacaaagaggtacccacagccaaacccagacagagggtt
agtggcaaagagccagtacagcaagaaaattctgctgtaacaccagtagtctctgacaaa
aatctgaacagtgacatccaaacattatctagttcaagtatgagcagagtggacaaaaca
ggcaggcagacaaaggagaacgttgcagattttgacccattccccagtactgagcttctt
tccaaagacccatgggcacagctgacgcagaacccagaagcagatgacatttttacccac
agtgtacagagagagcagaaactagaagttcagcgaatgacagatgatcttgataacatt
tttagtcaagagaaaccaacagatcaatttgctagttttaatggcagtgattcagacaaa
cacagtgagtacaggcaaaaagatgaagattcaaagcaagtcagtcctgctttccaaaga
aggtattcacagaaacgaaaacagattgttccgtccacaactcactccgataagacttcc
aagtctcgacaagaacccgcatataaagaaaaaacaaccttaaccaaagctaatcaaggc
ctctccgcaaaagacgtcgtgaatgagccaatcgcactgaagcttcaagctgatgtgaaa
acaccaagaaatttttatggaggagaggatccatttggaactgaaccttttgctgtaacc
tctgcctcgaccccatcagagcccctccaggaagttatggaagaaccagcatctcaggca
ggaggtttgtctgggggaaagacacttttgcaagcgtgggtctcaccctctgagtttcag
cctgtcagtgctcagaatagcaatggaggtgggctagccttaactccacgcaggcctcat
cctgtgaagcccatgagctcagttgagagccagcatcccatcagcacccctgctttgaaa
gagattaaggtccgtgacagcacaccagggaagattcaggtggcagactcggtgcaaagt
ggaccttacactcagctgacacaggaagagttgatcacgatggtggtgaagcagcaagcc
gacctgtccaggaaagacgctaagatcgttgagctcgaagactacatagacaacctgctg
gtccgcgtcatagacgaaaaacccactatcctgcaatctcttaactctgccaagccagtg
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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