KEGG   Siniperca chuatsi (mandarin fish): 122884528
Entry
122884528         CDS       T08948                                 
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu00900  Terpenoid backbone biosynthesis
schu01100  Metabolic pathways
Module
schu_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:schu00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    122884528 (ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:schu01006]
    122884528 (ggps1)
Enzymes [BR:schu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     122884528 (ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     122884528 (ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     122884528 (ggps1)
Prenyltransferases [BR:schu01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   122884528 (ggps1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 122884528
NCBI-ProteinID: XP_044070486
Position
LG11:complement(9979110..10016509)
AA seq 342 aa
MGKSTYEIEQILWSTVLMTNLLCELEAMDGDLEAASERILLEPYKYLLQLPGKQVRTKLT
QAFNHWLNVPEDKLQVIIEVTDMLHNASLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSA
NYVYFLGLEKVLTLEHPEAVRVFTRQLLELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKS
GGLFGLTVNLMQLFSDWKQDLKPLLDTLGLFFQILDDYANLSSREYSENKSFCEDLTEGK
FSFPAIHAIRSGPESTEVQNILRQRTENVDIKRYCVDYLEKVGSFAYTRQTLRDLEVEAY
RLIREFGGNPQLESLVKHLSKMHNEAEDTSESNTEPCSSHNH
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgggaaaaagcacgtacgaaatagaacaaattctctggtctacagttcttatgactaat
ttgttgtgtgaacttgaagccatggacggtgacttggaagctgcctctgagcgaattctg
ttggaaccatacaagtacttgttgcaactgccaggaaagcaggtgaggacaaaactaacc
caagcatttaaccactggcttaatgttccagaggacaaactgcaggtgatcatcgaggtg
acagatatgctgcacaacgccagcttgctcatagatgacattgaggacagctccaagctg
cggcggggcttccccgtggcccacagcatctatggcatcccctccgttatcaactcagcc
aactacgtctacttcttggggttggagaaggtgctgaccctggagcaccctgaggctgtc
cgagtgtttacccggcagctgctggagctgcaccgtggtcagggcctggacatccactgg
agggacacctacacctgtcccactgagcaagagtaccgcaacatggtgctgcagaaaagt
ggagggctctttggcctgactgtgaacctgatgcagctcttctccgattggaaacaggac
ctgaaacccctcctggacacgctgggcctcttcttccagatccttgatgactacgccaac
ctcagctctcgtgagtacagcgagaacaagagcttctgtgaggacctgaccgagggcaag
ttctctttccccgccattcatgccatacggtcgggtccagagagcaccgaggtgcagaac
atcctgaggcagcgcacagagaatgtggacatcaaacgatactgtgtggattacctggag
aaggtaggctcgtttgcctacacccgtcagactctgcgggacctggaagtggaggcctac
cgcctcatcagggagttcgggggaaaccctcaactggagagccttgtcaaacacctcagc
aaaatgcataatgaggctgaggacacatcagagtccaatactgagccatgctccagccac
aaccactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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