KEGG   Siniperca chuatsi (mandarin fish): 122885275
Entry
122885275         CDS       T08948                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:schu03041]
    122885275 (cwc22)
Spliceosome [BR:schu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    122885275 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    122885275 (cwc22)
SSDB
Motif
Pfam: MA3 New_glue
Other DBs
NCBI-GeneID: 122885275
NCBI-ProteinID: XP_044072063
Position
LG12:21395066..21416188
AA seq 986 aa
MDSPGRSPSPAQKEPSGPSEDESSPTAERPQQTGSVERSPKERASPQASPAGRPPSKSPA
SSSSDSSSSDDDEDEHHGALRKIRSSVAQIKRSRSKSRSKERDRSMSRERDRSSSRGRDG
SRSRSRGRDGSRSRSRGRDRSRSRSRGRDRSRSRGRDRSRERDRDRYDRGRYTRDRYDDR
RDDRGGRFDRWTNRDAESDHRRRGRSASPPTDREPVAADQPPVKKKKEELDPILTRTGGA
YIPPAKLRMMQQQITDKSGLAYQRMSWEALKKSINGLINKVNVSNIVMIIQELLQENIVR
GRGPLARSVLQAQAASPIFTHVYAAVVAIINSKFPQIGELILKRLILTFRKSYRRNLKQQ
CLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVSIAFLKECGLKLTEVSPRGI
NAIFERLRNVLHESAIDKRVQYMIEVMFAIRKDGFKDHPVIPEGLDLVDEEDQFTHMLPL
EDEYDPEDILNVFKMDPDFLENEEKYKTIKRDILDEGSSDSGEEGDGSDEDDEEENEEEG
EDEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPDSQTKELCNMILDCC
AQQRTYEKFFGLLAGRFCLLKKEYMESFEGIFSEQYETIHRLETNKLRNVARLFAHLLYT
DSVPWSVLECIRMSEETTTSSSRIFVKILFQELCAYMGLPRLNQRLKDPTLQPFFEGLFP
RDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVESSDSSSSSASSSSSD
SSSDSSSESDSDSSDSDSSSSSSSSSSSDSDSKHRKKKKRKEQSEEKKKKKEKDKKKKKD
KPSDKKRAGCKNADEDDSNDEKQARKDRKGSAREEAERERAREAEERAREAEERERAREG
PRRSRRDERAEEEEQEERRRKTDVQSRQRDGERERERDRGRDRERERARERENEEKSERE
REKQRDRERNKENRDRNREREERRRR
NT seq 2961 nt   +upstreamnt  +downstreamnt
atggactctccaggcagaagtcccagtcctgcgcagaaagaacccagtggaccttcagaa
gacgagtccagtccaacagcagagaggccccaacagaccggctcggtcgagagaagcccc
aaagagagggcgtctcctcaggccagtcctgcaggccgcccaccctccaagagtcctgcg
tccagcagttcagacagcagcagcagcgatgatgatgaggatgaacatcatggggcattg
aggaagattaggagcagcgtggctcagatcaaaagatcaagatccaagtccaggtccaaa
gagcgagacagatccatgtccagagagcgagacagatcaagctccaggggacgagatgga
tccagatcaagatccaggggacgggacggatccagatcaagatccaggggacgggaccgg
tctaggtcaagatccaggggacgggaccggtccaggtcaagagggcgagaccggtccaga
gagagagaccgggaccgctacgacagaggacgctatactcgcgatcgctatgacgatcgc
cgtgacgacaggggcgggcgttttgaccgctggaccaatcgggatgcagagtcagatcac
aggaggcgaggccgctcagcctcccctccaacagacagggagcccgtggcggccgaccag
ccgccagtcaagaagaagaaggaggagctcgacccgatcctgacgaggaccggtggagct
tacatccccccagccaagctacgcatgatgcagcagcaaatcactgacaagagcggcctg
gcctatcagaggatgagctgggaggctctgaagaagtccatcaatggtctgatcaacaaa
gtcaacgtgtcaaacatcgtcatgatcatccaggagctgctgcaggagaatatcgtcagg
gggaggggtccgctggcccgctcggtgctgcaggctcaggcggcgtctcccatctttact
catgtttacgccgctgttgtcgccatcatcaactccaagttcccacagattggagagctg
attctcaaacgcctcatcctgaccttcaggaagagctaccgccgcaacctcaagcaacag
tgcctgacagcctcaaagtttgtggcacatctcataaaccagaacgtggcccatgaggtt
ttgtgtctggagatgctcactctgctgctggagcgtccgactgacgacagcgtggaggtc
tccatcgccttcctgaaggagtgcggactcaaactgaccgaggtgtccccgcgaggaata
aacgccatatttgagcgtctcaggaacgtcctccatgagtcggccattgataagagggtc
cagtacatgatcgaggtgatgtttgctatcaggaaagacggtttcaaagatcacccagtg
atcccagagggcctggacctggtggacgaggaagaccagttcacccacatgctgccactg
gaggacgagtacgacccagaagacatcctcaatgtgtttaagatggacccagacttcctg
gagaacgaagagaaatacaaaaccattaaaagagatatcctggacgaggggagcagcgat
tcaggggaggaaggagacggcagtgatgaagacgatgaagaagagaacgaggaggaggga
gaagatgagaaggttacaatctttgatcagacagaagtcaacctggttgctttcagaaga
accatctacctcgctatacagtccagtttggacttcgaggagtgcgctcacaaactgatc
aagatggactttcctgacagccagacgaaggagctgtgtaacatgatcctggactgctgc
gctcaacagagaacctacgagaagttctttggtctgctggctgggaggttctgtctgctg
aagaaggagtacatggagagttttgaggggattttttcggagcagtacgaaacaattcac
cgactggagaccaacaaactgaggaacgtggctcgactgttcgctcacctgctctacaca
gactctgtgccctggagtgttttggagtgtatcaggatgagtgaggagaccacgacttcg
tctagcaggatctttgtgaagatccttttccaggagctctgtgcctacatgggccttccc
agactcaatcagaggctcaaagacccgactctgcagccgttctttgaaggtctttttcct
cgtgataatcccagaaacactcgcttcgccatcaacttcttcacttctattggactggga
ggactgacggacgaattgagggaacatttgaagaacgctccgaagatgatcatgactcaa
aaccaggaagtggaatcctctgactcctcgtcctcatcagcctcctcttcctcatctgac
tcctcctcagactcatccagcgaatcagactcagactcctcagactctgactcctcctcc
agcagcagcagcagcagcagctcagactcggacagcaaacataggaagaagaagaagaga
aaagaacaaagtgaggagaagaagaagaagaaagagaaggacaagaagaagaagaaggac
aaaccctctgacaagaagcgagccggatgcaagaatgccgacgaggatgatagtaacgac
gagaagcaggcgaggaaggacagaaaaggcagtgcgcgtgaggaggcggagcgtgagcgt
gcacgtgaggcggaggagcgtgcgcgtgaagcagaggagcgcgagcgtgcacgtgagggg
ccccgccggagcagacgagatgaaagagcagaagaagaggagcaggaggagaggaggcga
aaaacggacgttcaaagcagacaaagagacggagagagggagagagagagagacaggggg
agggatagagagagggagcgagcgagagagagagagaatgaggagaagagtgagagagag
agagagaaacagagggatagagagaggaataaagagaacagagacaggaacagagagcga
gaggagaggaggaggagataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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