KEGG   Shewanella cyperi: JYB88_08845
Entry
JYB88_08845       CDS       T07829                                 
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
scyp  Shewanella cyperi
Pathway
scyp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    JYB88_08845 (thrS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:scyp01007]
    JYB88_08845 (thrS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scyp03016]
    JYB88_08845 (thrS)
Enzymes [BR:scyp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     JYB88_08845 (thrS)
Amino acid related enzymes [BR:scyp01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   JYB88_08845 (thrS)
Transfer RNA biogenesis [BR:scyp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    JYB88_08845 (thrS)
 Prokaryotic type
    JYB88_08845 (thrS)
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon tRNA_SAD TGS MCM_WH_arc
Other DBs
NCBI-ProteinID: QSX31692
UniProt: A0A975ALQ2
Position
complement(2027860..2029788)
AA seq 642 aa
MPVITLPDGSQRVFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLITDDATLSII
TTKDEEGLEILRHSCAHLLGHAIKQLWPETKMAIGPVIDNGFYYDVDLDHKLHQDDLDAL
EKRMLELAKTDYNVIKRVVSWQEARDTFESRGESYKMAILDENISKDATPALYHHEEYTD
MCRGPHVPNMRFCHHFKLMSVAGAYWRGNSDNKMLQRIYGTAWGDKKALSTHLARLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFRELETFVRHKLNEYVYDEVKGPFMMD
RVLWERSGHWDKYADAMFTTSSEAREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGC
CHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQTEVSACIKMVYDTYSTFGFQNIVVKL
STRPEKRIGDDAMWDRAESALIEALNANGISFEILPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFIGILIEEYAGRFPTWLAPM
QVVVMNITDKQSDYVEEVVKFFKEQGIRASKDLRNEKIGFKIREHTLRRVPYLLVVGDQE
MENREIAVRTRDGVDLGKMSIELFASKVKEQISHRSLKLLED
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcccgtaattacacttcctgatggcagccaacgcgtgtttgccaatcccgtatccact
ctggatgttgccgccgacataggccctggtctcgcaaaggcctgtattgccggtcgcgtt
aatggcgaactgaaagatgcctgtgatctgataaccgatgacgccaccttatccatcatc
accaccaaggatgaagagggtctggagatattgcgccattcctgtgcgcacttgctcggt
catgctatcaagcaactgtggcccgaaaccaagatggccattggtcctgtgatcgacaac
ggcttctactatgatgtggatctggaccacaagctgcatcaggatgatctggacgcgctg
gaaaagcgcatgctggaactggccaagacagattacaacgtgattaaacgcgtggtgagc
tggcaggaagcccgtgacacctttgaaagccgcggtgagtcgtacaagatggcgatcctg
gacgagaacatctccaaggatgctaccccggccctgtaccatcacgaagaatacacagac
atgtgccgtggtccccacgtgccaaatatgcgtttctgccatcatttcaaactgatgagt
gtagccggtgcctactggcgcggtaactccgacaacaagatgctgcaacgcatttacggt
accgcctggggtgacaagaaagccctcagcacccacctggcccgtctggaagaagcggcc
aaacgcgaccatcgtaagattggcaagcagctcgacctgtaccatatgcaggaagaagca
ccgggaatggtgttctggcacaacgatggctggagcattttccgcgaattggaaacattc
gtgcgtcacaagctcaatgagtatgtgtatgacgaggtaaaaggtccgttcatgatggac
agggtgctctgggagcgttccggtcactgggacaaatacgctgatgccatgttcaccacc
agcagtgaagcccgtgaatatgccatcaagccgatgaactgcccgggtcacgtgcagatt
ttcaaccaggggttgaagtcctaccgcgatctgccgctgcgtatggcggaattcggttgc
tgtcaccgcaatgagccatcaggttcgctgcacggcttgatgcgggtccgtggctttacc
caggatgatgcccatatcttctgtaccgaagagcaggtgcagaccgaggtgagcgcctgt
atcaagatggtctatgacacatactccacctttggtttccagaacattgtggtcaagctg
tctacccgtccggaaaagcgcattggtgacgatgctatgtgggacagggcagaatcagcc
ctgattgaagcgctcaatgccaacggcatcagtttcgaaatcctgccgggcgaaggtgcc
ttctacggacccaagattgaatttaccctgcacgactgccttgaccgcgcctggcagtgc
ggcacagtgcaactggattacgccttgcctggccgtttgggtgccacctatgtggccgaa
gataacagtcgtcagacaccagtgatgatccaccgtgccattttgggctctttggagcgt
tttatcggcattctcatagaagaatatgctggtcgcttcccaacctggctggcgcctatg
caggttgttgtgatgaacataacggacaagcagtctgattatgttgaagaagttgtcaaa
ttcttcaaagaacagggcattcgtgcatctaaagacttgaggaatgagaaaattggcttt
aaaatacgcgagcacaccttaaggcgtgtcccttatctgttggtggtcggtgaccaggaa
atggagaacagggaaatcgcggtgcgaacccgtgacggggtcgatcttggaaagatgtcg
atagagttattcgcttccaaggtaaaagaacaaatttcgcatcgtagtctcaaattgttg
gaggattag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (7)   

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