KEGG   Solanum dulcamara (climbing nightshade): 129881959
Entry
129881959         CDS       T09577                                 
Name
(RefSeq) nuclear poly(A) polymerase 4
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129881959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129881959
Enzymes [BR:sdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     129881959
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     129881959
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 129881959
NCBI-ProteinID: XP_055812048
Position
1:85503478..85510564
AA seq 606 aa
MVSSESLSGSAAPPAKKYGVTKPLSLAGPTEADLQRNAELEKFLRESELYESEEETSRRE
EVLQRLDEIVKQWVKQLTRQRGYTDQMVEDANAIIVTFGSYRLGVHGPGADVDTLCVGPS
YVNREEDFFILLHDILAEMEEVRELQPVPDAHVPVMKFKFQGISIDLLYASITLLVVPED
FDISDQSVLYNVDEPTVRSLNGCRVADQILKLVPNAKHFRTTLRCLKFWAKRRGVYSNVT
GFLGGVNWALLVARICQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFLVWD
PRKNPKDRTHHMPIITPAYPCMNSSYNVSPSTLRVMMDQFQIGNKICEDVELNKAQWPAL
FEHYFFFEAYKNYLQVEIVAADNDDLLAWKGWVESRLRQLTLKIERDTNGTLQCHPYPNE
FVDMSKPCPHCAFFMGLQRQKGVKVQEGQQFDIRGTVDEFKQDVSMYSYWRPGMDIYVSH
VRRKQIPAYVFPDGYKRPRQSRNTTQHTPEKDAKGCMSPEERHSKRKQEIDTVDVQSEKL
PKRSSISPQDIGSVSPASVSSWSGGSSQMIVPEESLQEVKTAGLQNRSSDDKSIGDIGEQ
KPCLSE
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggtgagttccgagagcttaagtgggtctgctgcaccaccagcgaagaaatatggtgtc
acaaagccattatctcttgctggacccactgaggcggatcttcaaagaaatgcagaacta
gaaaagtttttgagggaatcagaattgtatgagagcgaggaagagacttcaaggagagaa
gaagtactgcagcgacttgacgagattgtaaaacaatgggtgaaacaattgactcgccag
agaggctacacagatcaaatggttgaggatgcaaatgctatcatagtcacctttggttct
tatcgtctaggggttcatggaccaggagctgacgttgacacattgtgtgttggtccctct
tatgtcaatcgagaagaagatttctttatcctcctccatgatattttagctgaaatggaa
gaagttcgtgaacttcaaccagttcctgatgctcatgtccctgttatgaaattcaaattt
caagggatatcaattgatcttctttatgcaagtataactctcttggttgttcctgaagat
ttcgatatctcagaccaatctgtactctataatgtggatgagccaactgttagaagtctg
aatggttgtcgagttgctgatcaaatactgaaactagttcctaatgctaagcacttccgc
acaactcttagatgtctgaagttctgggccaaaagacgtggtgtttattccaatgttact
ggatttcttggtggggtgaattgggctcttttggttgctcgcatttgccagttctaccca
aatgcaatccctagtatgcttgtttctaggttcttccgtgtttatacacaatggcgttgg
ccaaatcctgtgatgttatgcccaatagaagaggatgaacttgggtttcttgtttgggat
ccgcgcaagaatcctaaagacagaactcatcatatgccaattatcactcctgcctaccct
tgcatgaactctagctacaacgtctcaccaagcactcttcgagtaatgatggaccaattt
cagattggtaacaagatttgtgaggatgtggagttgaataaagcacagtggcctgctctt
tttgagcattattttttctttgaggcgtacaaaaactatctccaggttgagatcgtagca
gcagataatgatgatttgctagcttggaaaggctgggtggaatcccggcttcgacaactc
actctaaagatagagcgggataccaatgggacgttgcagtgccatccttatcctaatgaa
tttgtggacatgtcgaagccatgcccacattgtgcttttttcatgggtttgcagaggcaa
aagggtgtcaaagtacaagaaggtcaacagtttgatatacgtggaacagtcgatgagttt
aagcaagatgtaagcatgtactcttattggagaccgggcatggatatctatgtctcgcat
gttcgtaggaagcaaattcctgcttatgtctttcctgatggatataagagaccacgtcaa
tctagaaatacaactcagcatactcctgaaaaagatgccaaagggtgcatgtctcctgaa
gaaaggcattcaaagaggaagcaggaaatcgatacagttgatgtacagtctgaaaaactg
ccaaaacgctcgtctattagtcctcaagatataggatctgtttctcctgcaagtgtttct
agttggtcaggtggatcatcacagatgatcgttcctgaggagtcgctccaggaggttaag
actgctggccttcagaacagaagttctgatgataaatcaataggggatattggtgagcag
aaaccatgcctttctgagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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