KEGG   Solanum dulcamara (climbing nightshade): 129888776
Entry
129888776         CDS       T09577                                 
Name
(RefSeq) uncharacterized protein LOC129888776
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129888776
Spliceosome [BR:sdul03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    129888776
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    129888776
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 129888776
NCBI-ProteinID: XP_055819753
Position
5:complement(2950331..2956591)
AA seq 955 aa
MEKDLGENGHRRRRNDEDLEKVERQRHRDRSSSDDDERGDRRERRRVIERESGDDGRDDR
RARRRTTEHESGGGGNNGRDDRRLSRRRTERETRDDSDDDLRRKRRRDEREYSAERGDRR
PKEEQEEDDDDDGGERNKTRERRRISERVDDDEKDDPRERRRRNDSEDCGERDDRRERRP
KEEQEGEEDDGDGERDKMRERRRKSERADDDEKDDRRERRRRNDREDDAGRDGRTQRRPK
DERDDRKESRKKVSQVDEDDERDGRSKRRRRHEGDVKDDRKERKRREDDEKVQKRREDRV
DQYNDGRDGDRKEKNRNEEREKRVDGDDNDRKDVRQRVGSDKHGRDKTSKDNTQEDRALK
ASEVSKVQKQDGNLNVDTAKLGRSGGVYIPPFKLARMMKEVQDKSSVEYQRMTWDALRKS
INGLVNKVNAANLKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTK
FPEVGDLLLRRIILQLQRAYKRNDKPQLLAAVKFIAHLVNQQIVHELIALELLTVLLEKP
TDDSVEVAVGFVTECGSMLQDLCPRGLHGIFERFRGILHEGEIDKRVQFLIESLFALRKA
KFQGYPAVRPELDLVEQEDQLTHEVSLSDTIDPEITLDIFKPDPNFLENERKYEELKKAI
LGEESEEGDSDAVSENEDEDEDEESEEEDEEQMQIKDETETNLINLRRTIYLTIMSSVDF
EEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCF
VQQYSMIHRLETNKLRNVAKFFAHLLGTNALPWHALAYIRLTEEDTTSSSRIFIKILFQE
MSEHLGIRLLNERLNDPTMQDSLDSIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKN
MPKLIMQQQKPVSESDESGSSGSESSGSESESSTSSSDDSDSESDNSRRKRRRRR
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggagaaggatttgggtgagaatggacatcgtaggagaaggaatgatgaggatttggag
aaagtagagcggcaaaggcatagggatagaagcagctcggatgatgatgaaagaggtgat
aggagggagaggaggcgagtaatcgaacgtgaaagtggtgatgatggaagggatgacagg
agggcgaggaggcgaacaactgaacatgaaagtggtggtggtggtaataatggaagggat
gataggaggttgtcgaggcgaagaactgaacgtgaaactagggatgatagtgatgatgat
ttgaggcggaagaggcgaagagatgaacgtgaatatagtgctgaaaggggtgataggagg
ccaaaagaagaacaggaagaagatgatgatgatgatggtggtgaaagaaataaaacgagg
gagaggaggagaataagtgaacgggtagatgatgatgagaaggatgatccgagggagaga
agacgaagaaatgacagtgaagattgtggtgaaagggatgataggagggaaaggaggcca
aaagaagaacaggaaggagaagaagatgatggtgatggtgaaagggataaaatgagggag
agaaggagaaaaagtgaacgggcagatgatgatgagaaggatgataggagggagagaaga
cgaagaaatgaccgtgaagatgatgctggaagggatggcagaacacagaggaggccaaaa
gatgaaagggatgataggaaggaaagcagaaaaaaggtaagccaagttgatgaggacgat
gaaagggatggtaggagtaagaggagacgaagacatgaaggtgatgtaaaggatgatagg
aaggagaggaagcgaagggaagatgatgaaaaagtgcaaaagagaagggaggatagggtt
gatcagtataatgatggtagagatggggataggaaagagaagaataggaatgaagaaaga
gaaaagagggttgatggtgatgacaatgatagaaaggatgtgaggcaaagggttgggtct
gataagcatggaagagacaaaaccagtaaagataatacccaagaggacagggctctgaaa
gccagtgaggtctccaaggtgcaaaagcaagatggtaatttgaatgtcgatacagcaaaa
ttgggcaggagtgggggagtgtacattccaccattcaagttggctagaatgatgaaggag
gttcaggacaagagcagtgttgagtaccagagaatgacttgggatgctctgagaaagagc
attaatggactggtgaataaagttaatgcagcaaacctcaaaaacattattccggagttg
ttcgcagagaatttaattcgagggaggggtttgttttgtagatcctgtatgaagtcccaa
atggcttctccgggctttactgatgtgtttgctgctttggttgcggtcgttaataccaag
ttcccagaagtgggtgatcttttgttaagaaggatcatactgcagctgcaaagagcttat
aaacgtaatgataagcctcagctgttagcagctgtcaaatttattgctcaccttgtgaac
caacaaatcgtccatgagcttattgctcttgaactactcacggttttgttggagaaacct
actgatgacagtgttgaggttgcagttggttttgtgacagaatgtggttcaatgcttcag
gacctctgtcctcgaggattacatggaatctttgagcggttccgtggtatacttcatgaa
ggagaaatagataagcgggttcagttcttaattgaaagcctctttgcattgcgtaaagct
aagtttcagggttacccagctgtgcgtccagaacttgaccttgttgagcaggaagatcaa
ttaacacatgaagtctctctctcagatacaatagatccagaaattactttagatattttc
aagccggatcctaatttcttagaaaatgaaaggaagtatgaagaattaaagaaggcaata
cttggtgaagaatctgaggaaggagattctgatgccgtatcagagaatgaagatgaagat
gaggatgaagagtctgaagaagaggatgaggagcaaatgcaaataaaggacgaaacagag
acaaacttaatcaaccttcggagaacgatctaccttactattatgtctagcgttgacttt
gaagaagcagggcataagctgttgaaaatcaaactagagcctggtcaggagatggaattg
tgcataatgttattggagtgctgcagtcaggagaggacttatcttcgttactatggacta
ctgggacagcgattttgcatgatcaacaaaattcatcaagaaaactttgagaaatgcttt
gtgcagcagtactccatgatccacaggctcgaaactaataaacttcgtaacgtggccaag
ttttttgctcatttgctcggcactaatgctcttccttggcatgctttggcttatatacgg
ctgacagaggaggacaccacctcttcctctcgtatatttattaaaatcctattccaggaa
atgtcggagcaccttggcattcgcttgttgaatgagcgtcttaacgaccccaccatgcaa
gattcccttgactctattttcccgaaggacaatcccaagaatacaaggtttgctatcaac
tttttcacttccattggtctcggtggtattactgaaaatctaagagagtatctgaagaac
atgccaaagcttatcatgcaacaacaaaagcccgtttctgaatcagatgagtctgggagt
tctggttctgaatcttcaggatctgaatcagaatcatcaacatccagttctgacgacagt
gatagtgaaagtgataatagtcggaggaagcggaggaggagaagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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