KEGG   Suncus etruscus (white-toothed pygmy shrew): 125996022
Entry
125996022         CDS       T09902                                 
Symbol
TUBB2A
Name
(RefSeq) tubulin beta-2A chain isoform X1
  KO
K07375  tubulin beta
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04145  Phagocytosis
setr04517  IgSF CAM signaling
setr04540  Gap junction
setr04814  Motor proteins
setr05010  Alzheimer disease
setr05012  Parkinson disease
setr05014  Amyotrophic lateral sclerosis
setr05016  Huntington disease
setr05020  Prion disease
setr05022  Pathways of neurodegeneration - multiple diseases
setr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125996022 (TUBB2A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    125996022 (TUBB2A)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    125996022 (TUBB2A)
  09142 Cell motility
   04814 Motor proteins
    125996022 (TUBB2A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125996022 (TUBB2A)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125996022 (TUBB2A)
   05012 Parkinson disease
    125996022 (TUBB2A)
   05014 Amyotrophic lateral sclerosis
    125996022 (TUBB2A)
   05016 Huntington disease
    125996022 (TUBB2A)
   05020 Prion disease
    125996022 (TUBB2A)
   05022 Pathways of neurodegeneration - multiple diseases
    125996022 (TUBB2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:setr03036]
    125996022 (TUBB2A)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:setr04812]
    125996022 (TUBB2A)
   04147 Exosome [BR:setr04147]
    125996022 (TUBB2A)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     125996022 (TUBB2A)
Cytoskeleton proteins [BR:setr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    125996022 (TUBB2A)
Exosome [BR:setr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125996022 (TUBB2A)
  Exosomal proteins of colorectal cancer cells
   125996022 (TUBB2A)
  Exosomal proteins of bladder cancer cells
   125996022 (TUBB2A)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 125996022
NCBI-ProteinID: XP_049620936
Position
18:complement(61437765..61476884)
AA seq 446 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSELQLERINVYYNEAAGNKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEQGEFEEEEEGEEEA
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgcgtgagatcgtgcacatccaggcgggccagtgcggcaaccagatcggtgccaagttt
tgggaggtcatcagtgacgaacacggcatcgaccccacggggagttaccatggagacagc
gagctgcagctggaacgcatcaatgtgtactacaacgaggctgcaggtaacaaatatgtc
ccccgggccatcctggtggacctggagccgggcaccatggactcagtgaggtcagggccc
tttggccagatcttcaggcccgacaacttcgtgttcggccagagcggcgccggcaacaac
tgggccaagggccactacacagagggtgccgagctggtggactcggtcctggacgtggtg
aggaaggagtcggagagctgtgactgtctgcagggcttccagctcacccactcgctgggc
ggtggcaccggctcgggcatgggcaccctcctcatcagcaagatccgagaggagtacccg
gaccgcatcatgaacaccttcagcgtcatgccctcgcccaaggtgtccgacaccgtggtg
gagccctacaacgccaccctgtccgtccaccagctggtggagaacaccgatgagacctat
tcaatcgataatgaggcgctgtatgacatctgcttccgcaccctcaaactcaccaccccg
acctacggagacctcaaccacctggtgtcggccaccatgagcggcgtgaccacctgcctg
cgcttccctggccagctcaacgctgaccttcgcaagctggccgtgaacatggtgcccttc
cctcggctgcacttcttcatgcccggcttcgcccccctgaccagccggggcagccagcag
taccgggccctcacggtgcccgagctgacgcagcagatgttcgactccaagaacatgatg
gccgcgtgtgaccctcgccacggccgctacctgaccgtggctgccatcttccgcggccgc
atgtccatgaaggaggtggacgagcagatgctgaacgtgcagaacaagaacagcagctac
ttcgtggagtggatccccaacaacgtcaagacggccgtgtgcgacatcccgccccggggc
ctgaagatgtcggccaccttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctcggagcagttcacggccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggacgccacggccgacgagcagggcgagttcgaggaggaggag
gagggcgaggaggaggcttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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