KEGG T04919: 108927438

Scleropages formosus (Asian bonytongue): 108927438

Entry

108927438         CDS       T04919

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

sfm Scleropages formosus (Asian bonytongue)

Brite

KEGG Orthology (KO) [BR:sfm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sfm03041]
    108927438
Spliceosome [BR:sfm03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    108927438
Complex C
   U4/U6.U5 tri-SnRNP related factors
    108927438

SSDB

Motif

Pfam:

MA3 MIF4G Cnd1 DUF7026

Other DBs

NCBI-GeneID:

108927438

NCBI-ProteinID:

XP_029103424

Position

21:7502924..7518104

AA seq 699 aa
MSVAVSDGCVAPGEESEGDGSPEKAEPGRRPRARSSGPSSKGSSDGDSSDEDSDGSEDSD
AGGRHRMKSRVAHIRHGLGDDSRDQRGSSSPEKRDGDPRSRSRSRSRPRSFHSWERERSE
DRDRWYQRGRRGTDRNSDRERYPSRDRDRERYRDRERDRERYERRSSRDRERSRRERSSR
EREVESRRRGRSPSPAQLDGPPTEEPAVKKKKEELDPILTRTGGAYIPPARLRMMQAQIT
DKASLAYQRMSWEALKKSINGLINKVNVSNIANIIHELLQENIVRGRGLLARSILQAQGA
SPIFTHVYAAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLTASKFVAHLINQN
VAHEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNVLHESE
IDKRVQYMIEVMFAIRKDGFKDHPVISEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKM
DTDFLGNEEKYKEIKKEILDEGSSGSGSGDDGEGSDEDENDEEAEEEGGDEQDKVTIFDK
TEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYEKFF
GLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARMFAHLLYTDSIPWSVLEC
IKMSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDL

NT seq 2100 nt +upstreamnt +downstreamnt
atgtccgtagctgttagtgatggttgtgtcgctccaggagaggagtcggagggcgatggc
agccccgaaaaagcggagccaggccgcagaccccgggcaaggagcagcgggccttcttcc
aaaggcagcagtgacggggactcgagtgacgaagacagtgacggcagcgaggacagtgac
gcaggtggccgccacaggatgaagagcagggtggctcacatccggcatggcttaggtgat
gacagcagggaccaacgtgggagctcctccccagagaaaagggatggtgacccgcgatcg
cggtctagatcgcgttccaggccccggtcctttcacagctgggagagggagaggtctgaa
gatcgggaccggtggtaccagaggggacgccgtgggactgacagaaacagcgacagagaa
cggtatcctagcagggaccgggaccgggagcgctaccgtgaccgcgagcgggaccgggaa
cgctacgagcgccgttctagcagagacagggaaaggagccgcagagagcgctctagccga
gagagggaggtggagtctaggaggaggggcaggtcaccctccccggcccagctggatggt
cccccgacagaggagcctgcggtgaagaagaagaaagaggagctggaccccattttaact
cggacaggcggggcttacattccccccgcgagactgcgcatgatgcaggcccagatcaca
gacaaggccagtctggcttaccaaaggatgagttgggaggctttgaagaagtcaatcaac
ggtctcattaacaaggtgaacgtctccaatatcgccaacattatccacgagctcctacag
gagaacattgtgagggggagggggctcctggcccgctccattctacaggcccagggcgca
tctcccattttcacccatgtctatgcagctgtggtggccatcatcaactccaagttcccc
cagatcggagagctcatcctgaagaggctgatccttaatttccgcaagggttaccgtagg
aatgacaagcaacagtgtttgacagcatccaagtttgtcgcacacctcatcaatcagaat
gtggctcacgaggtcctgtgcctcgagatgctgaccctactgttggagcgacccacggac
gacagcgtggaggtggccatcagcttcctgaaggagtgtggtctcaagctgactgaggtc
tccccaagaggcatcaatgccatcttcgagaggctgcgcaacgtcctccacgagtcagag
atcgacaagcgtgttcagtacatgattgaggtgatgtttgcgatccgcaaggatggcttc
aaggaccaccctgttatctcagaagggctggacctggtggaggaggatgaccagttcact
catatgctcccgttggaggacgactataacccagaggacgtcctaaatgttttcaagatg
gataccgacttcctcggaaacgaggagaagtataaagaaattaaaaaggagatcctggac
gaggggagcagcggctctggctccggcgatgacggggaaggcagcgacgaagacgaaaat
gacgaggaagcggaggaggagggcggagatgaacaagacaaagtcaccatctttgacaag
acagaagtaaatctggttgcgtttcgcagaaccatctaccttgccatccagtccagcttg
gactttgaagaatgtgctcacaaactaataaagatggacttccctgagagccaaacgaaa
gagttatgcaacatgattctggactgctgtgcccagcagaggacctatgagaagttcttt
ggacttctggctgggcgtttctgtctgctgaagaaagagtacatggaaagttttgaagcc
atattccaggagcagtatgaaaccattcatcgcctcgagaccaacaagctgcgaaacgtt
gccagaatgtttgcgcaccttttgtatacagattcgattccatggagtgtgcttgagtgc
ataaaaatgagtgaagacaccaccacctcctccagtagaatctttgtgaagatcctgttc
caggaactctgtgcctacatgggccttccgaaattgaatgaacgtctgaaggatctgtga

All links

Gene (24)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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