KEGG   Scleropages formosus (Asian bonytongue): 108928331
Entry
108928331         CDS       T04919                                 
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04145  Phagocytosis
sfm04517  IgSF CAM signaling
sfm04540  Gap junction
sfm04814  Motor proteins
sfm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108928331 (tubb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    108928331 (tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108928331 (tubb1)
  09142 Cell motility
   04814 Motor proteins
    108928331 (tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108928331 (tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfm03036]
    108928331 (tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sfm04812]
    108928331 (tubb1)
   04147 Exosome [BR:sfm04147]
    108928331 (tubb1)
Chromosome and associated proteins [BR:sfm03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108928331 (tubb1)
Cytoskeleton proteins [BR:sfm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108928331 (tubb1)
Exosome [BR:sfm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108928331 (tubb1)
  Exosomal proteins of colorectal cancer cells
   108928331 (tubb1)
  Exosomal proteins of bladder cancer cells
   108928331 (tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 108928331
NCBI-ProteinID: XP_018597737
UniProt: A0A0P7TD36
Position
22:15286165..15289015
AA seq 468 aa
MREIVHLQIGQCGNQIGSKFWEVIGDEHGINAVGNYEGDSRLQLERLNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRGSRIGQLFRPDNFIHGSSGAGNNWAKGHYTEGAELVENVMDRV
RNESESCDCLQGFQIVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSIMPSPKVSDTVV
EPYNATLSIHQLIESTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
TACDPRHGRYLTVAGVFRGRMSTKEVDEQMLAIQQKNSAYFVDWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFSVMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATADLEWEPEGGEESASSAPVHRSQTRTEVKTEIITETITE
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgcgcgaaattgtacaccttcagatcggacagtgcggaaaccagattggctccaagttc
tgggaggtgatcggtgatgaacatggaattaatgctgtggggaactacgagggtgacagc
agactgcaactggagaggctcaatgtctatttcaatgaggcacatggaggaaaatatgtc
ccccgggctttacttgtagacctggagccaggaaccatggacagtgtgaggggtagcaga
attgggcaactcttcaggcctgataacttcatccatggtagttctggtgccggaaacaac
tgggctaaagggcactatacggagggggccgaactggtggaaaacgtgatggacagagtg
cgcaatgagagcgagagctgcgactgcctccagggcttccagatcgtgcactccctgggc
ggtggaactggctcgggcatgggcacgctcatcattaacaagatccgcgaggagtacccg
gaccgcatcatgaacagcttcagcatcatgccctctccaaaagtttcggacaccgtggtg
gaaccctacaatgccaccttgtccatccatcagctcatagagagcacagatgagacctac
tgcatcgacaatgaggccctttatgacatctgtttccgcacactgaagctgaccactccc
acgtatggcgacctcaaccacctggtgtccctgactatgagtggggtcaccacatctctg
cgatttcccggtcagctcaatgctgacctgcgcaagcttgctgtcaacatggtgcccttc
ccacgcctgcacttcttcatgccaggcttcgctcccttgacagcccgtggcagtcagcag
taccgtgccctcaccgtgccagaactcacccagcagatgtttgatgcccgcaatatgatg
acagcctgcgatccccggcacgggcgctacttgacagtcgctggggtctttcgtggccgc
atgtctactaaggaagtagatgagcaaatgttagccatacagcagaagaatagtgcctac
tttgtcgactggattccacacaacgtaaaggtggctgtgtgtgacattcctccacgaggg
ctcaagatggcctcaacgtttattggcaataacacagccatccaagaaatattccgtcgt
gtgggcgaacagttctccgtcatgttccggcgcaaggctttcctacactggtacactggc
gagggtatggatgagatggagttcacagaggccgaaagcaatctcaatgacctggtgtct
gagtaccagcagtaccaggatgccactgcagaccttgaatgggagccagaaggaggagaa
gagtcagcatcatcagcaccagttcatagatctcaaacaaggacagaggttaagactgaa
attataactgagactattacagaatga

  All links  
Gene (93)   
   RefGene (90)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (103)   

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