KEGG   Salvelinus fontinalis (brook trout): 129817760
Entry
129817760         CDS       T11136                                 
Name
(RefSeq) poly(A) polymerase type 3-like
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129817760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfon03019]
    129817760
Enzymes [BR:sfon01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     129817760
Messenger RNA biogenesis [BR:sfon03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     129817760
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 129817760
NCBI-ProteinID: XP_055729277
Position
20:complement(33866241..33884008)
AA seq 715 aa
MPFPSTNQVLLGRETPKHYGITSPISLAQAKEADLVLTHRLTEALKPYGVFEEELELQRR
IHVLGKLNTLVKEWIRDVSETKNLPASVIETVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERTDFFSSFLDKLKEQEEVKDLRAVEEAFVPVIKLSFDSIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAVMVDEFKQGLSITDEILQSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKESRDKEEVSTMWVIGVIFKKMEASENLNVDLTIDIQSFTDTVYRQAMNSKMFEADM
KIQAMHVKRRQLHQLLPSLVMPKRRKHSTEGLRQMNDSSLDLSLDSDNSMSVPSPTAVPA
TVPTSTPVKCGPLGPPPSPIAAAASQPEAPAVKRPGSPTQEDRKRFKSDAEDSAIEKKPS
GDPVPTSLTPSTPPTMGPPAAPHNSRQEMLEEEDPSPVPETRTTEDGAAAGEECTTVETQ
VNEDRMSEEMPASEGEGKMEADIKRMVSADLSDVPLLPANPIPVVKNSIKLRLSR
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgccctttccgtctacaaaccaggtgttgttgggtcgggagacacccaaacactatggg
atcacttctcctatcagcctggcccaagccaaggaggctgacctggtcctcacacacagg
ctgactgaggccctgaaaccatacggggtgtttgaagaggagctggaactacagcgcaga
atacatgtgttgggaaaactgaacaccctggtgaaggaatggatccgtgacgtcagtgag
acaaagaatctgcctgcctcagtgattgaaacggttggagggaagatcttcacatttggg
tcctacaggttaggagtccacactaaaggtgctgacattgatgccctgtgtgtggctcct
cggcatgtggagagaacggacttcttctcctcgttcctggacaagctgaaggagcaggag
gaggtcaaagatttgagggctgttgaggaggcatttgtccccgtgataaagctgtctttc
gacagcattgagattgatatcctgtttgcccggttagcgttgcaaaccatcccagagaat
ctggacctccgagatgacgggttgctgaagaaccttgacatccgctgcataaggagtctt
aatggttgtagagttacagatgaaatcctccatcttgtgcccaacattgagaacttcaga
ctgacactgaggaccatcaagctgtgggctaaacgtcataacatctacagtaacatcctg
ggcttcctgggtggtgtatcctgggccatgctggtagccaggacctgccagctctacccc
aacgctgtggcctccacccttgtacacaagttcttcctcgtcttctccaaatgggaatgg
cccaaccctgttctcctgaagcagccagaggactgcaacctgaacctgccagtctgggac
cccagggtgacccccagtgaccggtatcacctgatgcccatcatcacaccagcctacccc
cagcagaactccacctacaacgtctctgcctctacacgtgccgtcatggtggacgagttc
aaacagggtctgtccatcacagatgaaattttgcagagtaaagcagagtggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatattgtgttgctagcgagcgcc
cccaccgagaagcagcacctggagtgggtgggtctggttgagtctaagatcaggatctta
gtaggaaacctggagaagaatgagttcataacgctggcccatgtcaacccccagtccttc
cccggacccaaggaaagcagggacaaagaggaggtcagcaccatgtgggtgataggggtt
atctttaagaagatggaggcatcagagaacctcaacgttgacctgaccattgacatccag
tcctttactgacacggtgtaccggcaggcgatgaacagcaagatgtttgaggcggacatg
aagatccaggccatgcatgtgaagaggagacaacttcaccagctactgcccagcctggtc
atgcccaaacgcaggaagcactcgacagaggggcttcgtcagatgaatgacagtagtctg
gacctatcgttggacagcgacaacagtatgtcggtgccgtcccccacggccgtaccagcc
actgtgcccacgtcaaccccagtgaagtgtggcccactaggtccccctccaagtcccatc
gcggctgcagccagccagcctgaggccccggctgtgaagagacctggctcccctacgcag
gaagacaggaagaggttcaaatcagatgctgaggattcagccattgagaagaagccttca
ggagacccagtccccacaagcctgaccccctctactccgcccaccatgggccccccagcg
gccccccacaactctcgccaggagatgctggaggaggaggacccctccccagtaccagag
actaggacaacagaggatggtgcagctgctggagaggagtgcactactgtggagacacag
gtcaatgaggacaggatgtctgaggagatgcctgcttctgaaggggaaggcaagatggag
gcagatattaagcgaatggtcagtgcggacctgtctgatgtgcccctcctgccagccaac
ccaattccagtggtcaagaactctataaagcttcgcctcagcaggtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system