KEGG   Salvelinus fontinalis (brook trout): 129838071
Entry
129838071         CDS       T11136                                 
Name
(RefSeq) tubulin beta chain-like isoform X1
  KO
K07375  tubulin beta
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04145  Phagocytosis
sfon04517  IgSF CAM signaling
sfon04540  Gap junction
sfon04814  Motor proteins
sfon05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    129838071
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    129838071
  09144 Cellular community - eukaryotes
   04540 Gap junction
    129838071
  09142 Cell motility
   04814 Motor proteins
    129838071
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129838071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfon03036]
    129838071
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sfon04812]
    129838071
   04147 Exosome [BR:sfon04147]
    129838071
Chromosome and associated proteins [BR:sfon03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     129838071
Cytoskeleton proteins [BR:sfon04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    129838071
Exosome [BR:sfon04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129838071
  Exosomal proteins of colorectal cancer cells
   129838071
  Exosomal proteins of bladder cancer cells
   129838071
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 129838071
NCBI-ProteinID: XP_055760730
Position
38:18201880..18213521
AA seq 445 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGQMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEDGEFEEEADDDDP
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcatatccaagccggccagtgcggtaaccagattggtgccaagttc
tgggaggtgatcagcgatgagcacgggatcgaccccacaggcacctaccatggagacagc
gacctgcagttggacagaatcagtgtctactacaacgaggcaacaggtggtaaatatgtg
cctagggccatccttgtggaccttgagcctggcaccatggactctgtgaggtccggaccc
tttggacagatcttcaggccagacaactttgtgtttggccagagtggtgctggtaacaac
tgggccaagggccactacacagagggagcagagctggtggactctgtcctggatgtagtg
aggaaagaggcagaaaactgtgactgtctgcagggcttccagctcacccactccctgggt
ggaggcacggggtcgggcatgggcaccctgctcatcagcaagatcagagaggagtaccct
gaccgcatcatgaacaccttcagcgtggtgccctcaccgaaggtatcagacacagtggtg
gagccctacaacgccaccctctctgttcaccagctagtggagaacacggacgagacgttc
tgcatcgacaacgaggccctctatgacatctgcttccgcacgctcaaactgaccacgccc
acctatggtgaccttaaccacctggtgtcagccaccatgagcggcgtcaccacctgcctg
cgcttccctggccagctcaacgctgacctccgcaaactggccgtcaacatggtgcctttc
ccccgtctgcacttcttcatgcccggcttcgcccccctcaccagcaggggcagccagcag
taccgtgccctcaccgtgcccgagcttacccagcaggtgttcgacgcaaaaaacatgatg
gctgcctgcgaccctcgtcacggccgctaccttactgtggccgcagtgttccgtggccaa
atgtccatgaaggaggtggacgagcagatgcttaatatccagaacaagaacagcagctac
tttgtggaatggatccccaacaacgtgaagaccgctgtctgcgacatcccaccccgcggc
ctcaagatgtctgtcaccttcatcggcaacagcacagccatccaggagctgttcaagcgt
atctctgagcagtttactgccatgttccgccgcaaggccttcttgcactggtatactgga
gagggcatggacgagatggagttcactgaggcagagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggacgccaccgctgaggaagatggagagttcgaggaggaggct
gatgacgatgacccttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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