KEGG   Salvelinus fontinalis (brook trout): 129857998
Entry
129857998         CDS       T11136                                 
Name
(RefSeq) tubulin beta-4B chain-like
  KO
K07375  tubulin beta
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04145  Phagocytosis
sfon04517  IgSF CAM signaling
sfon04540  Gap junction
sfon04814  Motor proteins
sfon05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    129857998
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    129857998
  09144 Cellular community - eukaryotes
   04540 Gap junction
    129857998
  09142 Cell motility
   04814 Motor proteins
    129857998
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129857998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfon03036]
    129857998
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sfon04812]
    129857998
   04147 Exosome [BR:sfon04147]
    129857998
Chromosome and associated proteins [BR:sfon03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     129857998
Cytoskeleton proteins [BR:sfon04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    129857998
Exosome [BR:sfon04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129857998
  Exosomal proteins of colorectal cancer cells
   129857998
  Exosomal proteins of bladder cancer cells
   129857998
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 129857998
NCBI-ProteinID: XP_055782804
Position
6:complement(49247982..49250714)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYNGDSDLQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagagagattgttcatttgcaagcagggcagtgcggtaatcaaattggcgcaaagttc
tgggaggtgattagtgatgagcatggcattgaccccactggaagttacaacggggacagt
gatcttcagctggaaagaattaatgtgtattacaatgaagcttcaggtggaaagtatgtg
ccacgcgcagtacttgtggacttggagcctgggaccatggactctgtgaggtccggacca
ttcggtcaaatcttcaggcctgacaactttgtcttcggtcaaagtggagcaggtaacaac
tgggccaagggccactacaccgagggtgcagagctggttgactctgtcttggatgtggtg
aggaaagaggctgagagctgtgactgcctgcagggattccagctcacccactccctggga
ggtggaaccggctctggcatgggcaccctgctcatcagcaagatccgtgaagagtacccc
gaccgcatcatgaacactttcagcgtggtgccctccccaaaagtgtcagacactgtggtc
gagccctacaatgccaccctctcagtccaccagctggtagagaacacagacgagacctac
tgtatcgacaacgaggcgctctacgacatctgcttccgtaccctaaaactcaccacgccc
acctacggagacctcaaccacctggtgtctgcaaccatgagtggggtcaccacctgtctc
cgcttccccggccagctcaacgctgacctgcgcaaactggcagtcaacatggtgcccttc
ccccgtctccacttcttcatgcctggctttgcccccctcaccagcaggggcagccagcag
tacagagccctgacggttccagagctcactcagcagatgtttgactcgaagaacatgatg
gccgcctgcgaccctcgtcacggccgttacctcaccgtggctgcagtcttccgcgggcgc
atgtccatgaaagaggtggacgagcaaatgctgaacgtacagaacaagaacagcagctat
ttcgttgaatggatccccaacaacgtcaagactgcagtctgtgacattcctccccgtggc
ctcaaaatggctgccaccttcattggaaacagtactgccatccaggagctgttcaagcgc
atctctgagcagttcacagctatgttccgccgaaaggctttcctccattggtacacagga
gaaggcatggatgagatggagttcactgaggcagagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaagacgccactgcagaggaggagggcgagtttgaagaggagggt
gaagaggagttggcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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