KEGG   Sinocyclocheilus grahami (golden-line barbel): 107548411
Entry
107548411         CDS       T04918                                 
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
  KO
K14402  cleavage and polyadenylation specificity factor subunit 2
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107548411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107548411
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     107548411
    U7-dependent histone pre-mRNA processing factors
     107548411
SSDB
Motif
Pfam: CPSF100_C Beta-Casp RMMBL
Other DBs
NCBI-GeneID: 107548411
NCBI-ProteinID: XP_016084561
Position
Unknown
AA seq 573 aa
RDEQLLTNVMETLRGDGNVLIAVDTAGRVLELSQLLDQIWRTKDAGLGVYSLALLNNVSY
NVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLSRVPSPKVVLCSQPDLE
AGFSRELFIQWCQDAKNSVILTYRTTPGTLARYLIDNPGEKRIELEIRKRCRLEGRELEE
YMEKEKMKKEAAKKLEQAKEVDMDSSDESDMDDDLEQPAVVKTKHHDLMMKGEGGRKGSF
FKQAKKSYPMFPTHEERVKWDEYGEIIRPEEFLVPELQATEEEKSKLESGLTNGEEPMEQ
DLSDVPTKCTSTTQALDIRARVMYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD
LAESCKAFSGKDIKVYTPKLQETVDATSETHIYQVRLKDSLVSSLQFCKAKDTELAWIDG
VLDMRVEKVDTGVVAEMGDAKEETENGEPAMDVTPDLTTEPSAAANQRAIKTLFGEDDRE
ISEESDVIPTLEPLPAHEVPGHQSVFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVA
VRRTEAGRICLEGCHCDDYYKIRELLYQQYAVV
NT seq 1722 nt   +upstreamnt  +downstreamnt
cgggacgagcaactgctcaccaatgtcatggagaccctccgcggcgacgggaacgtgctg
atcgccgtggatacggcgggacgagtgctggaactgtctcagctccttgatcagatctgg
aggaccaaagacgcaggattgggtgtttactcgctcgccctgctcaacaacgtcagctac
aacgtggtggagttctcaaagtcccaggtcgagtggatgagcgataaactgatgcgatgc
ttcgaggacaagaggaacaaccctttccagttccgccacctgtcgctctgtcacagcctg
tccgatctgagccgcgtgcccagcccgaaggtggttctgtgcagccagcccgatctggag
gccggcttctcccgagagctcttcatacagtggtgccaggatgccaagaactcagtcatc
ctcacctacagaaccacaccgggaacgctggcccgctacctcatagacaacccaggggag
aagagaatcgagctggagataagaaaacgttgcagactggaaggacgagaactagaggaa
tacatggagaaagagaaaatgaagaaagaggctgccaaaaaactggagcaggcgaaagag
gtggacatggactcgagcgatgagagcgatatggacgatgatctggagcagccggcggtg
gtgaagaccaagcatcatgacctgatgatgaagggcgagggcgggaggaagggcagcttc
ttcaaacaggccaaaaagtcctaccccatgttccctacacacgaggagcgagtcaaatgg
gatgaatacggcgaaatcataaggcccgaggagtttctggttccagagctccaggccaca
gaagaggagaagagcaaactggagtctggactgactaacggagaggagccgatggagcag
gacctgtccgacgttcccaccaaatgcaccagcaccacacaagcgctagacatcagagct
cgagtcatgtacatcgattacgagggccgttctgacggggactccattaagaagatcata
aaccagatgaaacccagacagctaatcatcgttcacgggccgcctgaggccagccaggac
ctggccgagtcctgcaaggccttcagcggcaaagacatcaaagtttacacgccaaaactg
caggagactgtggacgccaccagcgagacccacatttaccaggtcagactgaaggactcg
ttggtcagttcgctgcagttctgtaaagccaaagacacagagctggcctggatcgatggc
gttctggatatgcgggtggagaaagtggacacgggtgtcgtcgcagagatgggagacgcc
aaagaggagacggagaatggagagccagccatggacgtcacgccggacctgacgactgag
cccagcgccgcggctaaccagcgggccatcaagactctgtttggagaggacgacagggag
atttcagaggagagcgacgtcattcccacgctggagccgctgcctgctcatgaggtcccg
ggtcatcagtctgtgttcatcaacgagcctcgcctgtcggactttaagcaggtcctgctg
cgtgaagggatccaggccgagtttgtgggcggagttctggtgtgtaataatctggtggct
gtcaggaggacggaagcgggccgcatctgtctggaaggctgccattgtgatgactactac
aagattcgtgagctgttgtatcagcagtacgctgtagtttaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (8)   

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