KEGG   Sinocyclocheilus grahami (golden-line barbel): 107563593
Entry
107563593         CDS       T04918                                 
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like isoform X1
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120  Ubiquitin mediated proteolysis
sgh04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107563593
   04120 Ubiquitin mediated proteolysis
    107563593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sgh04121]
    107563593
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107563593
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107563593
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H FANCL_C zf-Nse
Other DBs
NCBI-GeneID: 107563593
NCBI-ProteinID: XP_016103970
UniProt: A0A672NLJ4
Position
Unknown
AA seq 618 aa
MVRAALATGTSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLAVLDFLFVNHSCHSIITRGASVQLVFGFEYAI
LMTMVLTTFVKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAPAAPANAP
VPPPVNVAPGMMPQFPPGLFPFWGPFPGVPPPAAPGAQAATDTPQTSTTATQAQGAESGA
SSSTQPNADSASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSSMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNAGETSTSV
NVESSSSTGNTETPSQENEAQSDGSVNGATGFSPPDSTTGVDKDRKEGDEDEDDSEPNAA
ELRRRRLRKLETTNTPDH
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggtgcgagccgctcttgccacaggcactagtttggtgctgactggcgcagtggttgct
catgcctacttcctcaagcaccagttctaccccactgtggtgtacctcactaaaagcagt
cccagcatggcagttttatacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaggtctttttcgggcaactgagagctgctgaaatggagcacctgattgaacgc
tcctggtacgcggtgaccgagacctgtctagcctttacggtcttcagggatgatttctct
ccgcgcttcgtggcccttttcactttgctgcttttcctcaagtgtttccactggctggct
gaagacagagtggactttatggaaaggagtccaaatatctcatgggtctttcacttcaga
gttctctctctaatggtgttgctggcagtgttagactttctgtttgtcaatcattcgtgt
cacagcattataacaagaggagcgtcagtgcagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctcaccaccttcgtcaagtacaccttgcatacaattgatctgcag
agtgagaatccgtgggacaataaggccgtctacatgctctacacagagctctttacaggt
ttcatcaaggtgcttttgtatatggcgttcatgaccataatgataaaagtgcacaccttc
cctctgtttgccattcgacccatgtatctcgcaatgcggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctctatccagatgccacc
cctgaagacttgcaagccactgataatgtgtgcatcatttgcagagaagagatggtgact
ggagccaagaaactgccgtgcaaccacatctttcactcaagttgccttcgctcatggttc
caaagacagcagacgtgtccgacgtgtcgtatggatgtcctccgagcgtcccagccaaac
cagactcctgccccagctcctgcacaagcacctgcccctgctgctcctgctaatgccccc
gtacctccacctgtcaatgttgctccaggtatgatgcctcagtttcctccgggtctgttt
cccttttggggtcccttcccaggcgtgcctcctcctgctgccccaggtgcacaggcagct
actgacactccacagaccagcaccactgcaacacaggcccagggagcagaatcaggagcc
agcagctcgacccagccaaatgcagacagtgcctctgctgctcccggagcaatgcctgga
ttccccttctccatgcctccacctttcccatcagctccatggctgccgatgcctccacct
ccaccctttatgtcatccatgccaccgccaccatcgactctgtccagcatgtcagaggcc
gagctcagagaactggagcaggagggcaggcggggtttggaagccaggttgcagtgcctt
cacaacatccacacattgctggatgccgccatgctcaacattcatcactacctcagcacg
gtggctacattaagtcctccaagatcagaaaccaacgctggtgagacgagtacatcggtg
aatgtggagtcctcttcctccacgggcaacacggaaactcccagtcaggagaacgaggct
cagagcgatggatctgtaaatggggctacaggcttttctccaccagactcaaccacagga
gtggacaaagacaggaaggagggggatgaagatgaggatgacagtgagccaaatgccgcc
gagttgagacgacgtcgcctgcgtaaactggagaccactaatactcctgaccactga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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