KEGG   Sinocyclocheilus grahami (golden-line barbel): 107586757
Entry
107586757         CDS       T04918                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04382  Cornified envelope formation
sgh04510  Focal adhesion
sgh04512  ECM-receptor interaction
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107586757
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107586757
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107586757
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    107586757
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgh04147]
    107586757
   00536 Glycosaminoglycan binding proteins [BR:sgh00536]
    107586757
Exosome [BR:sgh04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107586757
Glycosaminoglycan binding proteins [BR:sgh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107586757
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 107586757
NCBI-ProteinID: XP_016129764
Position
Unknown
AA seq 1666 aa
MTRTRQITSTSLLLFRRLLLALMTIHTALGGDKTERCDGRDCRVCQCFPPKGERGNPGVL
GQQGRQGLPGLPGPQGLRGEKGQRGLIGLPGLSGPEGDQGFQGDQGYAGLGGVPGHPGPG
GLPGLPGKDGCNGTRGQRGLNGEIGRPGFPGPMGLPGLKGAKGDAFTRTRFLPGTPGVDG
LPGIPGPAGLKGVFGPQGPPGGMGPDGFMGFQGLPGPRGLPGDTGSSLPGPKGDEGEQGK
QGKPGPFEYVEPNPEDYVKGEKGRKGQKGICGAPGPEGLEEPPAEKGEKGIIGLPGQRGL
PGYPGRNGFPGLKGALGDNGLPGLYGNPGPKGYSGDPGPKGNPKYHYNNMMGPTGDRGLP
GAAGLPGDRGAMGIPGPSGDPGASIRGPVGESGLQGLNGLKGEKGDPGKIYGSYLNYGEP
GKRGPTGPKGQNGIPGNPGYYCVPGERGESGQVGNRGPPGLKGVQGRKGPVGGCACEPLG
DLPGHPGPPGPPGFRGDPGQKGFRGPPGDDGFIGEMGGRGVTGPRGFTGVRGLKGEKGEV
MVICKKGEKGGTGSVGPSGKPGYNGRKGADGKMGAPGDPGSLGDSVVGPLGDRGCPGAAG
VKGLRGPPGPPGPNMMGSVGRRGEPGEPGPQGQTGPPGPKGVQGDALPCEPGIHGAPGSK
GMPGRKGEIGQLGNPGCKGQIGPDGPKGESGNPGDSRLAGFQGPVGSLGDPGDTGPDGTS
ISGSPGTPGNRGPQGLKGSFGDSTTGAPGQMGPGGIQGCQGPKGVPGSPGSIGLQGASGV
PGLPGRKGEKGMDGTPGAPGCPGGGPELCDKGQAGPPGKPGPPGFTGQRGCPGEKGPPGG
AGSQSIGAKGERGKPGTPGYQGRTGLQGPSGLEGDSGNPGAPGPKGLPGFPGQDGYPGNI
GKTGPLGAPGPKGFRGLNGYPACPGVNGAKGQKGYIGPPGPPGDMISVPVKGQLGPPGLN
GENGVFGERGNKGDPGPPGQPGYPGHNGPPGFESGQRGAPGVPGLSGEPGARGQHGPKGI
VGFPGDNGDPGDPGMSGLPGNPGFPGFDGPKGDKGESTGGPGPTGERGPCGYTGVSAPPG
DKGDYGDPGPQGPRGSSGPPGPPGNNGLTGHPGVVGPSGPCGRHGLEGPLGPPGKPGPKG
NQGCGGLRGSPGPPGLHGLDGLKGDMGEMGYRGEDLSGDRGFIGPAGDKGTPGDPGLQGP
SQTGVRGPNGQLGGQGDPGPMGPAGFRGEECKIPKPGPSGERGYAGPDGAPGPKGEKGEA
GRVFTVSGDFGEPGGPGSPGYKGEKGISGPRGLLGSDGLEGPKGEGGQCGLMGLPGPSGT
KGDCGPPGLCGAKGDKGDPGPKGETGAVKRPATPYPLPRGPTGAHGAPGPVGDVGDHGPN
GIGGLKGIKGQNGDIGFSGSSGTEGPVGLPGSPGESGEKGEGGSRGPPGPDGDQGPPGPL
SSGFLLVKHSQSETVPTCPKGLTELWNGYSLLYLEGQERAHTQDLGQAGSCLRMFSTMPF
SCCNMDTCDYASRNDKSYWLSTTASIPMNSILRGMEIQQHISRCVVCEASSPTITLHSQN
GTRPRCPSNWSRLWFGYSFLMHTGSGDEGGGQSLTSTGSCLQDFRSQPFVECQGSYGTCQ
YSPTFFSFWLTRASVEQFDSVPDRTVLNGQNQRDSISLCGVCMKNN
NT seq 5001 nt   +upstreamnt  +downstreamnt
atgacacgcacccgccagatcacctcaaccagcctccttctcttcaggaggcttttattg
gcacttatgacgatacacacagctttggggggagacaagacagaaaggtgcgatggtcga
gactgcagggtctgccagtgtttcccccccaaaggagagagggggaatcctggtgtgtta
ggtcagcagggccggcaggggcttccaggtttgcctggcccccaaggacttcgtggtgaa
aagggtcaacgtggactcataggcttgcctgggctctctggcccggaaggagaccaaggc
tttcaaggagatcaaggctatgctggattaggtggagtgcctggtcatccagggcctggt
ggtcttccggggcttccagggaaggatggctgtaatggaaccagagggcagcgtgggttg
aatggtgagataggacgacctggcttcccaggaccaatgggactacctgggttaaaagga
gccaaaggagacgcatttacaaggacaaggttccttcctggaacacctggtgtcgatgga
ctacctggaatacctggaccagcagggctaaaaggggtctttggcccacaaggtccacca
ggaggaatgggacctgatggatttatgggctttcaaggattaccaggtccaagaggccta
ccgggagacacaggaagttcactgcctggaccaaaaggagatgagggggaacaggggaaa
cagggtaaaccaggtccttttgaatatgtggagcccaacccagaagactatgtgaaaggc
gaaaaggggaggaaaggtcaaaaaggaatttgtggagcacctggcccagagggtcttgaa
gagcctccagcagaaaaaggagagaaaggcataattggtttacctggtcaaagaggcttg
cctggatatccaggaagaaatggctttccaggacttaagggagcactaggggataatggt
ctccctggtctatatggcaacccagggccaaagggctactcaggagaccccggacctaaa
ggaaacccaaaataccattacaacaatatgatgggaccaactggagatcgtgggcttcct
ggtgcagccggacttcctggggatagaggggcgatgggtatacctggaccctctggtgat
ccaggagcatctataagaggtccagtgggtgaatctggtttgcagggtcttaatggactc
aaaggagaaaaaggtgacccaggaaaaatatacgggtcatacttaaactatggggaacct
ggaaaacgtggccctactggacccaaaggacaaaatggaattcctggtaatcctggttac
tactgcgtgcctggtgagcgtggagaatctggacaggttggaaatagaggaccccctgga
ttaaaaggtgttcaggggagaaaaggccctgttgggggatgtgcatgcgagccccttggt
gatctacctggtcatcctggccccccaggccctccgggtttccgtggtgatccagggcaa
aaggggttccggggtcctcctggtgatgacggattcatcggagagatgggtgggagaggt
gtaactggtcccagaggcttcacaggtgtcagagggcttaaaggagagaaaggagaagtt
atggtgatctgcaaaaagggggagaaaggtggcacgggatctgttggaccatctggaaaa
ccagggtataatgggaggaaaggggctgatgggaaaatgggtgcccctggagatcctgga
tctctgggagatagtgttgttggtccgctgggtgacagggggtgtccaggagctgctggg
gtaaaaggcctcagaggtccacctggtcctcctggccctaatatgatggggtcagtgggg
cgacggggagaaccaggggaaccaggacctcaaggtcagacagggccccctggtcctaaa
ggcgttcaaggtgatgccctgccctgtgaacctggcatacatggagccccaggttctaaa
ggaatgcctggtcgtaaaggtgagataggtcagcttggaaatccaggatgcaaaggacaa
attggaccagatggtcccaagggagagagtggaaatcctggcgatagtaggttagcagga
tttcaaggtccagttggatctttaggagatccaggtgacactgggccagatggcaccagt
attagtggctcacctggcacacctggtaatcgtggaccccagggtctgaaagggtctttt
ggagactctactacaggggccccaggacagatggggcccggtggtattcagggatgtcag
ggccctaaaggtgtccctggatctcctgggtcaattggattgcaaggtgcatctggagtc
cctggacttcctggtagaaaaggggaaaaaggaatggatggtacaccaggagcacctggt
tgcccaggtgggggaccagagctgtgtgacaaaggacaagctggtccacctggtaaacca
ggaccaccaggcttcactggacagagaggctgccctggagagaaaggaccacctgggggg
gcgggatctcaaagcattggagccaaaggagaacgtggtaaacctggtaccccaggctat
cagggacgcacaggccttcagggaccttcaggactcgaaggggacagtggaaaccctgga
gcccctggaccaaagggtttgcctggatttcctggtcaagatggctatcctggcaacata
gggaagactggccctttaggggctcctggaccgaaaggctttaggggtctcaatggatat
ccagcttgcccaggggtaaacggagccaagggccagaaaggatacattgggcctccagga
cctccgggagacatgatttcagtgcctgtgaaaggccagctagggccacctggacttaat
ggggagaatggggtctttggagaaaggggtaataaaggtgacccagggccgcctggacaa
ccagggtatcctggacataatggacctccagggtttgaaagtggccagcgtggagcgcca
ggcgttcctgggttgtctggcgagcctggtgcacgtgggcaacatgggccaaagggaatt
gtaggattcccaggggataatggtgatccaggtgatcctggaatgtctggtctgccagga
aaccctggtttccctgggtttgatggtcctaaaggtgacaaaggggaatctactggtggg
ccaggaccaacaggtgagagagggccatgcggatacacaggcgtgtcagctccccctggt
gacaaaggagactatggtgaccctggcccacaagggcctagggggagctctggtccacct
ggaccacctgggaacaatggcctgactggacatccaggagtggttggaccctccggtccg
tgtggaagacatggtctagaaggtcctctggggcctccaggtaaaccgggccctaaagga
aaccaaggatgcggtggtcttagaggatctccggggccccccgggctccatggacttgat
ggcctgaagggggacatgggtgaaatgggatatcgaggagaggatttaagcggtgatagg
ggctttataggaccagctggagacaagggcactccaggagacccagggttgcaaggtcca
tcacaaacaggtgttcgaggtccaaacggacagcttgggggccaaggagaccctggtcca
atgggtcctgcaggctttcgtggtgaagaatgtaagattcctaaacctggacctagtgga
gaacggggttacgctgggccagatggagctccagggcccaagggagagaaaggagaggca
ggcagggtgttcacagtgagtggtgattttggtgaaccaggtggtcctgggtcaccaggg
tataaaggagaaaaaggaatcagtgggcccagaggcctcctagggtctgacggcctagaa
ggtccaaaaggtgaaggaggacaatgtggacttatgggcctcccgggaccttctggcacc
aaaggagattgtggacccccaggactttgtggtgcaaaaggagacaaaggggacccaggg
ccaaaaggagagactggggctgtcaaacgtcctgctactccttatccccttcctcgtggt
cctactggtgctcatggtgcacctggcccggttggtgacgttggtgatcatggacctaat
ggcattgggggtctgaaaggtataaagggacaaaatggagatattggattctctggaagt
tctgggaccgaaggaccagtcggactacctggaagccctggagagagcggcgagaaagga
gaagggggctctcggggacccccaggaccagatggtgatcagggtcctcctggaccattg
tcctccggctttcttttggtgaagcacagccagtctgagactgtgcccacttgtcctaaa
ggcttaacagagttatggaatggctacagcctactatatctggagggtcaagagagagca
cacacacaagacctgggccaggcaggttcatgtttgcgtatgttcagcaccatgccattc
tcctgctgtaatatggacacctgtgattatgccagtcgcaatgacaaatcctattggctg
tctacaactgcctcaattcccatgaattccattctgagggggatggaaattcagcaacac
atcagcagatgtgtggtgtgtgaggcgtcatcgccaaccattacattacacagtcaaaac
gggactcgaccaaggtgtccatccaattggagcagactctggtttggatattcattcctt
atgcatacaggatcaggggacgagggaggtggacagtctctgacatcgacaggaagctgt
ttgcaggacttccgcagtcaaccgttcgtggagtgtcaaggttcgtatggcacgtgccag
tattcccccaccttcttcagtttctggctgaccagagcgagcgtggagcaatttgactcg
gttcccgacagaactgtgctcaacggacagaaccagcgcgacagcatcagcttatgcggt
gtctgcatgaagaacaactga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

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