KEGG   Sinocyclocheilus grahami (golden-line barbel): 107594613
Entry
107594613         CDS       T04918                                 
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107594613 (prpf38a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgh03041]
    107594613 (prpf38a)
Spliceosome [BR:sgh03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107594613 (prpf38a)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107594613 (prpf38a)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 107594613
NCBI-ProteinID: XP_016140201
UniProt: A0A672N4C3
Position
Unknown
AA seq 313 aa
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLNAERVCDVILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSEEEDEEEEKPERVQTPEPHRRNYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKKRSPSPRRDRDRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKRSRRGNE
NT seq 942 nt   +upstreamnt  +downstreamnt
atggctaatagaacggtaaaagatgctaatagtatacatggaacaaatcctcagtatctt
gtcgagaagattatacggacacgtatttatgagtccaaatactggaaagaggaatgcttt
ggacttacagctgagcttgtcgtggacaaagcaatggagctgaagtacgttggtggggta
tatggaggaaacatcaagccaactccattcttatgtctgaccctaaagatgctgcagatc
cagcctgaaaaggacattattgtggaattcatcaagaatgaagacttcaagtatgtccgt
ttgcttggagcgatgtatatgcgcctgactggaacttctgtggattgctacaagtattta
gagccgttatacaatgactacagaaaaatcaaaagccagaacagaaatggggagtttgaa
ttgatgcacgttgatgagtttatagatgagctgcttaatgcagagcgagtgtgtgacgtc
atcctccctagacttcagaagagacaggttttggaggaagctgagctgctggatactcgt
attagtgctctggaagaagatctagatgaggtggagaccagtgaggaggaggatgaggaa
gaagagaagccagagagagtgcagacaccagagccacacagaagaaattatagagatatg
gaccggccacgcaggtctccttctccacgctacagacgcagccgctcacccagaaggcgg
agcagatcacctaaaaaacgaagtccatcacccagacgtgatcgagatcgggaccgtcac
cgcagcaaaagtccccgtagacaccgcagcagatccagggacagaaggcatcgctccaaa
tctccaggtcaccacagaagtcacaggcatcgcagtcactccaagtccccagaaagtcgg
tcaaagaagagtcacaagagaagtcgaagaggaaacgagtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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