KEGG   Salvia hispanica (chia): 125204336
Entry
125204336         CDS       T09851                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125204336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125204336
Enzymes [BR:shis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     125204336
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     125204336
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 125204336
NCBI-ProteinID: XP_047958916
Position
2:complement(37449436..37455721)
AA seq 737 aa
MVGSDSLSSLPSLSPPTAEKKQPPKQWGVTKPLSLAGPIDADIQRNKELEKFLVESGLYE
SAEESAKREAVLALLKQIVKDWVKELTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGAD
IDTLCIGPSYVNREEDFFFVLHDILAKMEEVSELHPVPDAHVPVMKFKLDGISIDLLYAS
ISLLVIPDDLDISNISVLYDIDEPTVRSLNGCRVADQILKLVPNVKNFRITLKCLKFWAK
RRGVYSNVMGFLGGVNWAILVARLCQFYPKANPSMLVSRFFRVYTLWRWPNPVMLSEIED
NELGFSVWDPRKNPWDRNHLMPIITPAYPCMNSSYNVSSSTLRVMAEQFQFAKEICEDIE
LNKLQWNALFEHYLFFESYKNYLQVDIIASDLDDLRSWRGWVESRLRQLTLMIERDTTGK
LQCHPYPHDYVDSSKQCAHCVFFMGLQRKQGEVIQEGQQFDIRKTVDEFRHQINSYGYWK
PGMDIYVSHVRRKQIPSYVFPEGYKRSRHTRSLSQQQVEKNSSEGNEGCRPESAERIPKR
KKGCDGSEVDGSPEKRPSISPQRQVSVSPEFICSRDSLSGSCSPLFETTKEKPSVMVESL
LVNEIAKEVVPVVTEDVQTRSNGNDLQFDDCDKEMNPNPIQMQSNQGMHCTEFSDASYIP
SSGSSKYSVDRSSEDNAQLLMDNGCENGASILGDGLLEKLEPNEALAMVLKSGEGVGSEP
VEKNVVRHVYHNLKTTG
NT seq 2214 nt   +upstreamnt  +downstreamnt
atggttggatcggatagtttgagctcattgccttctctgtcgcctccgacggcagagaaa
aagcagccgccaaagcagtggggagtgaccaagcccctgtcgctagctgggccgattgat
gccgatattcagaggaacaaggagttggagaagtttttggttgagtcggggctttacgag
agtgcggaagaatctgccaaaagggaagcagttcttgcgctacttaagcagattgtgaaa
gattgggtgaaagagcttactcggttgaggggatacaccgatcaaatggttgaagatgcc
aatgctgttatttttacttttggttcttatagacttggtgtccatggccctggtgcagac
attgatactttgtgtattggaccatcctatgttaaccgggaggaagacttcttttttgta
cttcatgacattttggctaagatggaagaagtttctgaacttcatccagtacccgatgct
catgtccctgttatgaaattcaagcttgatggaatatcaattgatcttttgtatgcaagt
atttcactcttggtcattccagatgatttggacatctcaaacatctctgtgctgtatgac
atagacgaaccaactgttcgtagtcttaatggatgccgggtagctgatcaaattctcaaa
cttgttccaaatgtcaagaacttccggatcactctgaaatgcctaaagttctgggctaag
agacgtggtgtttattcaaatgtgatgggttttcttggtggtgtgaactgggcaattctc
gttgctcggttatgccaattttatccaaaagcaaatcctagcatgcttgtttctcgtttc
ttcagagtgtatacgttgtggcgctggccaaatcctgtgatgcttagtgaaattgaggat
aatgaacttgggttttctgtgtgggatcctcgtaagaatccttgggatcgaaatcatctc
atgccaatcataacccctgcctacccatgcatgaactccagttacaatgtttcatccagt
actcttcgggttatggcagaacagtttcagtttgccaaagagatctgtgaggatattgag
ctgaataagctgcagtggaatgctttatttgaacattatttattctttgagagctataaa
aattatctacaggtcgacatcattgcttctgatcttgatgacttgcgttcttggagaggc
tgggttgaatcccgtctgagacagctaactttgatgatagagcgggatacgactgggaag
ttacagtgtcatccttacccgcatgattatgttgattcctcaaagcagtgtgctcattgt
gtctttttcatgggcttacaaaggaagcaaggggaggttattcaggaaggccaacagttt
gacatccgtaagactgttgatgaatttagacatcaaataaactcatacgggtactggaag
cctgggatggatatatatgtttctcatgttcgtagaaagcaaattccttcttatgtgttt
ccagagggctacaaacgaagtcgacatacgagatcattgagtcagcaacaagttgaaaag
aattctagtgaaggtaacgagggctgcagaccagaatctgctgagaggatcccaaaacga
aagaagggctgtgatggatcagaggtggacggaagtcctgagaaaagaccctccattagt
cctcagaggcaggtttcagtctcgccggaatttatttgttcgagagattcattgagtggc
agttgctctccactgttcgaaacaacaaaggagaagccatcggtgatggtagaatctctc
cttgtgaatgaaattgccaaagaagtagttcctgttgttacagaggatgtgcaaaccaga
tctaatggaaatgacttgcagtttgatgattgtgataaagagatgaatccaaacccaata
cagatgcagtcaaaccaggggatgcattgtacagaattttctgatgctagctacatccca
agttctggctctagtaaatattcggtggatagatcgagcgaagataatgcgcagctgctt
atggataatggatgtgagaatggtgcttctattcttggggatggactactggagaagtta
gagcctaacgaagcgcttgcaatggttctcaaatctggagagggagttgggtccgaacct
gttgagaagaacgttgtgaggcatgtttatcacaatttgaaaacaacaggctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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