KEGG   Shewanella sp. MR-7: Shewmr7_3352
Entry
Shewmr7_3352      CDS       T00389                                 
Name
(GenBank) Uncharacterized P-loop ATPase protein UPF0042
  KO
K06958  RNase adapter protein RapZ
Organism
shm  Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:shm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shm03019]
    Shewmr7_3352
Messenger RNA biogenesis [BR:shm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Shewmr7_3352
SSDB
Motif
Pfam: PapZ_C RapZ-like_N nSTAND_NTPase5 AAA_16 AAA_22 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ABI44334
UniProt: Q0HRC1
Position
3965363..3966217
AA seq 284 aa
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNL
PEQDKVLVKQLASLPEGTELTSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEG
KLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
FDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELNHAKA
NT seq 855 nt   +upstreamnt  +downstreamnt
atgaaactggtcatagtgtcagggcgctcgggctcaggcaaatcggtcgcacttagagtg
cttgaagatctcggctactattgtgtcgacaatcttcctttgccgctgattggcagctta
ctcgaacagctcaagggcagtaacgatctcgtcgccatcagcgtcgacgtgcgtaacctg
ccggagcaagacaaggtactcgtcaaacagctcgcaagcctgccagagggcactgaactt
accagcttcttcttaaattccagcgataaagtactgctaaagcgctacagcgagactcgg
cgcttacatcccttatctaagagccgagtatcactgcaagaagccatcaagcttgaaggt
aaattgctcgagcccctgtcacaacagatggatcactacatagatacctcgaatctgaat
atctatgaactcagcgaccaagtacggcaaatcctgcttggcagtgtcgataaggagctg
gtgatcaacttcgagtccttcggttttaagcatggtatgccaaccgaagccgacttcatg
tttgatgtgcgctttttacccaacccccattgggaacctgagctgcgccccctcaccggc
ttagatgaacccgttgccgagtttttaaatcgccagccgctggttaataagttcatctgg
caaattgagaatttactcgaaacctggttgccccatttagagcgtaataaccgcagctat
ttgaccatagcgataggttgcaccggcggtcaacacagatcggtttacgtggccgaacaa
ctggctaaacgcttcagtaacggcaaacataaagtgaatgcccgccaccgagagttaaac
catgccaaagcttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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