KEGG   Shinella sp. HZN7: shn_03925
Entry
shn_03925         CDS       T04278                                 
Name
(GenBank) hypothetical protein
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
shz  Shinella sp. HZN7
Pathway
shz00521  Streptomycin biosynthesis
shz00523  Polyketide sugar unit biosynthesis
shz00525  Acarbose and validamycin biosynthesis
shz00541  Biosynthesis of various nucleotide sugars
shz01100  Metabolic pathways
shz01110  Biosynthesis of secondary metabolites
shz01250  Biosynthesis of nucleotide sugars
Module
shz_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:shz00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    shn_03925
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    shn_03925
   01055 Biosynthesis of vancomycin group antibiotics
    shn_03925
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    shn_03925
   00525 Acarbose and validamycin biosynthesis
    shn_03925
Enzymes [BR:shz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     shn_03925
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 NAD_binding_10 Sacchrp_dh_NADP NmrA adh_short KR Ldh_1_N
Other DBs
NCBI-ProteinID: ANH03273
Position
811119..812189
AA seq 356 aa
MASLDLDWIRTIVVTGGAGFVGSHIVDDLLAHCPNARIRVLDSFTYAADMSHLDAAFRTG
RVTLQEGDVGNLDLVTEMLKDADLVVHAAGESHVERAFSVPERFTLANALGTQVLVEAMG
RRRVPLMIHVSSAEVYGTGNGQPVGELAPLLPDNPYGASKAAAEMLIAGLRRSFDLDIRV
LRPVNIVGTRQNTEKLLPRFLELAAVGRPLPVHGDGLQTRGFVTMADFCSALRAVVARGA
KNATYNVAGDDFLDILSVARLVLDAVQDPVSGVSFIAGRPDNAGRPPLDTRALNALGWQA
KGTLRRELPMLAAWYGARIPAGLRRQVRQVPNLAPQRVQAVTQAAGSGLFRSLERH
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggcctcgctcgacctcgactggattcgcaccatcgtcgtgacgggtggtgccggcttc
gtcggctcgcatatcgtcgacgatctccttgcccattgcccgaacgcgcgcatccgcgtg
ctcgattccttcacctatgccgccgacatgtcgcatctcgacgccgccttccgcaccggc
cgcgtgacgttgcaggaaggcgatgtcggcaatctcgacctcgtcacggaaatgctgaag
gatgccgacctcgtcgtgcatgcggcgggcgaaagccatgtcgagcgtgccttctcggtg
ccggagcgcttcacgctggccaatgcgctgggcacgcaggtgctggtcgaggcgatgggc
cgccgccgcgtgccgctgatgatccatgtcagctccgccgaggtctatggcaccggcaat
ggccagccggtgggcgagcttgcgccgctcctgcccgacaatccctatggcgcctccaag
gcggccgccgaaatgctgatcgccggcctgcgccgctccttcgatctcgatatccgcgtg
ctgcgcccggtcaacatcgtcggcacgcgccagaacaccgaaaagctcctgccgcgcttc
ctcgagcttgccgccgtcggccggccgctgccggtgcatggcgacggcttgcagacgcgc
ggcttcgtcaccatggcggatttctgttcggcgctgcgcgcggtggtggcgcgcggggcg
aagaacgccacctacaatgtcgccggcgacgatttcctcgatatcctttccgtcgcgcgt
ctggtgctcgatgccgtgcaggatccggtctccggcgtcagcttcatcgccggcaggccg
gacaatgccggccgcccgccgctcgacacgcgggcgctgaacgcgctcggctggcaggcg
aagggcacgctgcgccgcgagcttcccatgctcgccgcctggtacggcgcgcgcataccg
gcgggcctgcgccgccaggtgcggcaggtgccgaaccttgccccgcagcgcgtgcaggcc
gtcacccaggccgccggctccgggcttttccgctcgctcgaacggcattga

  All links  
Gene (6)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (18)   

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