KEGG   Shewanella japonica: SJ2017_3548
Entry
SJ2017_3548       CDS       T04959                                 
Name
(GenBank) transcriptional regulator Crp
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sja  Shewanella japonica
Pathway
sja02020  Two-component system
sja02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sja00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SJ2017_3548
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SJ2017_3548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sja03000]
    SJ2017_3548
Transcription factors [BR:sja03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    SJ2017_3548
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HVO_A0261_N RepL HTH_24 HTH_23 MarR MarR_2 RepA_N HTH_ParB Sigma70_r4 WHD_RecQ_mid_bact bAvd HTH_11 HTH_28 GntR TrmB HTH_7
Other DBs
NCBI-ProteinID: ARD23797
UniProt: A0ABN4YMK1
Position
4200952..4201587
AA seq 211 aa
MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEESDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQAERTAWVRAKQPCEIAEISYKKFKQLIQVNPEILMKLTA
QMAYRLQSTSQKVGDLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq 636 nt   +upstreamnt  +downstreamnt
atggctctgattggcaagcctaaacctgatccaactttggagtggtttctttcacactgt
cacatccataaatacccagcgaaaagcaccttgattcacgcaggtgaagaatctgatacg
ctttactacatcgtgaaaggttcagtcgcagtattgattaaagatgaagaaggaaaagaa
atgatcctttcttaccttaatcaaggtgacttcattggtgaattaggtttattcgaagag
caagcagaacgtactgcttgggttcgtgcaaaacaaccttgtgaaattgctgaaatttct
tacaagaaattcaagcagttaattcaggttaaccctgaaattctaatgaagttgaccgct
caaatggcttaccgcttacaaagcactagccaaaaagtgggtgacttagccttcttagac
gttgcaggacgcattgcacagactttattacatcttgctaaacagccagatgcaatgact
cacccagacggcatgcaaatcaagatcactcgtcaagagattggtcagattgttggttgt
tcacgtgaaactgttggccgtatcttaaaaatgcttgaagaacaaaaccttattcaggct
cacggtaaaactatagtggtttacggaacacgttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (22)   

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