KEGG   Scomber japonicus (chub mackerel): 128359295
Entry
128359295         CDS       T09718                                 
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
  KO
K05032  ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    128359295 (abcc8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sjo02000]
    128359295 (abcc8)
Transporters [BR:sjo02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC8, 9 subgroups
    128359295 (abcc8)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_21 ABC_ATPase AAA_23 nSTAND1 TraD_N
Other DBs
NCBI-GeneID: 128359295
NCBI-ProteinID: XP_053175736
Position
5:complement(24089082..24148045)
AA seq 1640 aa
MISRYKPSPSSTMSLAFCGNENNSVAYNVDEGVLNNGCFLDALNVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWLLTFVLLFILVCEIAEGIVSDGFSQSLHLHLYM
PAGLAFMAGITSIVYYHNIETSNFPKLLLALLIYWVLAFTMKIIKFAKYTEHGIGPRQLR
YCITGLLMLLYGLLLAVEINVILGRRYMCFANPPEVKPPEDLQDLGVRFLQPFVNLLSKA
TYWWMNTFITSAHRRPIDLKVIGKLPIAMRALTNYIKLRKAFEEQKRPQGTATQGPKWIW
QALRKAFGRRLILSITFRFLADLLGFAGPLCISGIVHHISKDNRTIQEPMRLLGIYFISS
KEFLENAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMS
MGELTVAQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIA
VLAPVQYFVATKLSQTQKSTLEYSSERLKKTNELLRGIKLLKLYAWERIFCDSVEETRGK
ELTSLQAFALYTSISIFMNAAIPIAAVLTTFVVHVHISEDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSSDEIGEEQESRTMLTPGSSNHNQNRYQAVSSSK
SFPPSSFSFSSRRLQPLKVVNRKRPPRDDWDNYSSQGEHEGDRHSQNVDQDICIKIISGY
FTWTDGPPTLSNVDIKIPFGKLTMIVGQVGCGKSSLLLAALGEMQRISGSVIWNSLPILE
SEGDESPTDRDAASDGDVRKRDAVAYASQKPWLLNATLVENITFEMPMIKSRYKAVIEAC
SLQPDIDILPQGDQTEIGERGIILSGGQKQRISVARALYQQTSVVFLDDPFSALDIHLSD
HLMQDGILKLLREEKRTVVLVTHKLQYLPHADWIIAMKDGTIQTEGTLKDISNSEPELFE
QWKILMHRQDQEFETETVAASLTDLERKNLRRAMYSREAVGTEDDEEGGTPEWTCAMAPA
SGLALMFDRAEESVESDDDDNLSLVMRQRATIPWRSCGTYLSSAGLLLLILLLISQLLKH
SLMVAIDYWLAHWTSHVITAKIEASARNCTVVQDCGFSHSWYLLVFSVLCCLGIVLCLAT
SVAVEWTGLSVAKELHHNLLNKIILAPMRLFETTPLGSILNRFSTDMNTIDQHIPTTLEC
LSRSTLLCVSALGVISYVTPVFLIALLPLAVACYFIQKYFRVASRDLQQLEDSTQLPLLS
HFSETVEGLTTIRALRYEPRFRQRLLQFTDANNIASLFLTAANRWLEVRMEYIGACVVLV
AAVASITNSLYNQLSTGLVGLGLTYALMVSNYMNWMVRNLADMEVQLGSVKRINGLLKTE
PENYDGLLTVSQVPEGWPRHGEIKIQNLSVRYDTTLKPVLKNVNAHISPGQKVGICGRTG
SGKSSFSLAFFRMVDMFEGRIVIDNIDIAKLPLQTLRSRLSIILQDPILFSGTIRFNLDP
EMKATDEMLWEALDIAQLKPVVKLLPGGLDTMVTEGGENFSQGQRQLFCLARAFVRKSSI
LIMDEATASIDMATESILQKVVMTAFADRTVVIIAHRVHTILNADLVIVMKRGIILEYDR
PQALLEKEDSIFASFVRADK
NT seq 4923 nt   +upstreamnt  +downstreamnt
atgatctcacgatataaaccgagtcccagttccaccatgtccttggcgttctgtgggaac
gagaataactcggtggcctacaatgtggacgaaggggttctgaacaatggttgcttcctg
gatgccctcaatgtggtgccacacgtcttcctcctcttcatcaccttccccatcctcttc
attggctggggcagccagagttcaaaggtccacatccaccacagtacctggcttcacttt
cctggtcacaatctgcgctggctcctcacctttgtcctgctctttatcctcgtctgtgag
attgcagagggcattgtttccgatgggttcagccagtccctccatcttcacctctacatg
cctgcaggtctggccttcatggctggcatcacctcaattgtctactatcataacatagag
acctcgaacttccccaagctactattagccctgctgatctattgggtgctggccttcacc
atgaagatcattaagtttgccaagtacactgagcatggcatcggccccaggcagctgcgc
tactgcatcactggactgttgatgctgctgtatggactcctgctggctgtggagatcaat
gtcattctgggcaggcgatacatgtgtttcgcaaacccaccagaggtgaaacctcctgag
gatcttcaggacttgggtgtacgttttctgcagcccttcgtcaacctgttgtccaaagcc
acatactggtggatgaacaccttcatcacctccgctcacagacgacccatcgacctcaaa
gtcattggaaaactacccattgcaatgagagccctgaccaactacatcaagctgcgcaag
gcctttgaagagcagaagaggcctcaggggacagccacccagggtccgaagtggatctgg
caggccttgaggaaagcgtttggcaggcgtcttatcctcagcatcacattccgcttcctg
gccgacctgctgggcttcgccggtcctctctgtatctctggcatcgtccaccacatcagc
aaggacaaccgcaccattcaggaaccgatgaggttgcttgggatctatttcatttcctcc
aaggagtttctggagaatgcatatgtgctggctgtgctgctattcttcgctctgctcctg
cagaggaccttcctccaggcttcctattatgtggccattgaaacaggcatcaacctgcgt
ggagccatacagacaaaaatctacaataagattatgcgcctgtgcacttccaacatgtcc
atgggcgagctaactgttgctcaaatctgcaaccttgttgccatagataccaaccagctc
atgtggttcttcttcctgtgtcctaacctgtgggccatgccagtacagatcattgtggga
gtgatcctgctgtactacctcttgggaatcagtgccttgattggagcaactgtaattgct
gtgttagctcctgtccaatattttgtggccacaaagctgtcccaaacacaaaagagcact
ttggaatactccagtgagcgcttaaagaagaccaatgaactgctgcggggcatcaagctg
ctgaagctgtacgcctgggaacgcatcttctgtgacagtgtggaggagaccaggggcaag
gagctcaccagcctgcaggccttcgctctttacacatccatatccattttcatgaatgca
gccattcccatcgcagctgtattaacgacgtttgtggttcacgtccacatctctgaggac
gctgacctgtccccagctgtggcctttgcctctctgtccctctttcacatcctggtcacc
cccctcttcctgctgtccagcgtggtgcgctccactgtcaaggctctcgttagtgttcag
aagctcagcgagtttttctcaagcgatgagataggagaagaacaggagtccagaacgatg
ttaacacctggctccagcaatcacaaccagaatagataccaggctgtgtcatcctctaaa
tccttccctccgtcttccttctccttttcgtcccgacgcctccagcccctgaaggtggtg
aatcggaagcgccccccgagggacgactgggacaactacagctcacagggggaacacgag
ggtgatagacattcccagaatgtggaccaagacatctgtatcaagataattagtggttat
ttcacctggaccgacggaccaccaacactttctaatgtggacatcaagatcccttttggt
aagctgactatgattgtgggtcaggtgggttgtggaaaatcgtctctgttgctggcggca
ctgggagagatgcagagaatatcaggatcagtcatctggaacagcctgcccatcctggag
tctgagggagatgaaagtcccacagacagagatgctgcgagtgacggagatgtcaggaag
agagatgctgtggcctacgcttcccagaagccctggttgttgaatgccaccttggtggag
aacatcacatttgagatgcctatgatcaaatcaaggtacaaagctgtcatcgaagcctgc
tctcttcagcctgacattgacatccttccacagggggaccagacagagatcggggagcgg
ggcatcattctctcaggtggacagaaacagcgcatcagtgtggccagagccttgtaccag
cagaccagtgtggtttttctggatgacccattctctgccttagacatccacctgagtgac
cacctgatgcaggacggcatcctcaagctcctgagagaggagaagagaacggtggtgttg
gtcacacacaaacttcagtatctaccacatgcagactggattattgccatgaaggatggc
accattcagactgaggggactctgaaggacatctcgaactctgagcccgagctatttgag
cagtggaaaattctgatgcacagacaggaccaggagtttgagacggagacggttgccgcc
agtttgacagatctggagaggaaaaacctgcggagggccatgtattctagagaggccgtc
gggaccgaagacgatgaagaaggtggcacgcctgagtggacttgtgcgatggctccagca
tcaggtcttgccctcatgttcgatcgagcagaggaatctgtggagagcgacgatgatgat
aacctgtcactggtaatgcgtcagcgagccaccatcccctggcgctcctgtggcacctac
ctgtcctctgccgggctcctgctcctcatcttgctcctcatatcacagctcctcaaacat
tccctcatggtcgccatcgactactggctggcgcactggacgtcacacgtcatcacggcc
aagatagaggcatcggctcgcaactgtacggttgttcaggactgtggctttagtcactct
tggtatctgctggtgttcagtgtgctgtgctgcctgggcatcgtcctctgtctggccacc
tctgtggctgtggagtggacgggcctcagcgtggccaaagagctccaccacaacctgctc
aacaagatcatcctggctcccatgcggctgtttgagacgacgccgctcggcagcatcctc
aacaggttctctactgacatgaacacaattgaccagcacatcccgaccacgctggagtgc
ctctcccgctccaccctgctgtgtgtgtccgccctgggtgtcatctcctatgtgacccct
gtcttcctcatcgccctgctaccgctggctgtcgcctgctacttcatccagaaatacttt
cgagtggcctccagggacctgcagcagcttgaggacagcacccaactccccctactctcc
cacttctctgagacagtggaaggcctcaccaccataagggccctcagatatgagcccagg
ttcagacagaggttactgcagttcacagatgccaacaacatcgcctctctcttcctcaca
gcagccaatcgttggctggaagtacgcatggagtatatcggagcctgtgtggtgttggta
gcagctgtagcctccatcacaaactccctctataaccagctgtcgaccggtctggtgggg
cttggtctgacctatgcactcatggtgtccaactacatgaactggatggtgcgtaacctg
gcagacatggaagtacagctaggctcagtcaagaggattaacggcctcctcaaaactgaa
ccagagaattacgatggtctgctcactgtgtctcaggtccctgaaggctggccccgacat
ggagagatcaagatccagaatctgagcgtccgttacgacaccacgctgaagcctgtgctc
aaaaatgttaacgcacacatcagccctggacagaaggtgggaatctgtggcaggactggc
agcggcaaatcttctttctccctggccttcttccgcatggtggacatgtttgaggggagg
attgtgattgataacatcgacattgctaagctgcctttgcagaccctcaggtctcgcttg
tccatcatcctccaagaccccatcctgttcagcggcaccatccggttcaacctggatccg
gagatgaaggctacagacgagatgctctgggaggctctggatatcgctcagctgaagcct
gttgttaaattgcttcctggagggcttgataccatggtgacagagggaggagaaaacttc
agccagggtcagagacagctgttctgtctggccagagcctttgtcaggaagagcagcatc
ctcatcatggatgaagccactgcatccattgatatggcaacggagagtattctgcaaaaa
gtggtgatgactgcttttgctgaccgaacagtagttataattgcacatcgcgtccacact
atcctgaatgccgacctggtgattgtgatgaagcgggggatcatcctggagtatgacagg
ccccaggccctgctggagaaggaggacagtatctttgcctccttcgtgcgagcagacaag
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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