KEGG   Scomber japonicus (chub mackerel): 128377130
Entry
128377130         CDS       T09718                                 
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
  KO
K05858  phosphatidylinositol phospholipase C, beta [EC:3.1.4.11]
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo00562  Inositol phosphate metabolism
sjo01100  Metabolic pathways
sjo04020  Calcium signaling pathway
sjo04070  Phosphatidylinositol signaling system
sjo04081  Hormone signaling
sjo04082  Neuroactive ligand signaling
sjo04261  Adrenergic signaling in cardiomyocytes
sjo04270  Vascular smooth muscle contraction
sjo04310  Wnt signaling pathway
sjo04371  Apelin signaling pathway
sjo04540  Gap junction
sjo04621  NOD-like receptor signaling pathway
sjo04912  GnRH signaling pathway
sjo04916  Melanogenesis
Module
sjo_M00130  Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00562 Inositol phosphate metabolism
    128377130
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    128377130
   04371 Apelin signaling pathway
    128377130
   04020 Calcium signaling pathway
    128377130
   04070 Phosphatidylinositol signaling system
    128377130
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    128377130
   04081 Hormone signaling
    128377130
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04540 Gap junction
    128377130
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    128377130
  09152 Endocrine system
   04912 GnRH signaling pathway
    128377130
   04916 Melanogenesis
    128377130
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    128377130
   04270 Vascular smooth muscle contraction
    128377130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128377130
Enzymes [BR:sjo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.11  phosphoinositide phospholipase C
     128377130
Membrane trafficking [BR:sjo04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Phospholipases
    128377130
 Endocytosis
  Macropinocytosis
   Phospholipase C
    128377130
SSDB
Motif
Pfam: PI-PLC-X PLC-beta_C PH_14 PI-PLC-Y PLCB1-4-like_EFh EF-hand_like
Other DBs
NCBI-GeneID: 128377130
NCBI-ProteinID: XP_053193005
Position
17:13121790..13234023
AA seq 1245 aa
MAGAQPGVHALQLKPVSVPESLRKGNKFMKWDDDSTTVTPVTLTVDPKGYFLYWTDQNKD
TDLLDIAYIKDARNGKYTKTPKEAKLRELLDVSTLAGKMENRMLTVASGPDMVNITYLNF
MAFQEETAKEWAEELFSLASNLFVQNMSREACLEKAYTRMKLQLNPEGRIPVKNIFRMFS
ADRKRVETALENCSLPSGRNDSIPQEDFTPEVYTMFLNNICPRSELDHIFSDVGAKSRPY
LSVEQMTEFINNKQRDPRLNEILYPPLKPEQVQLLVDKYEPNTSLAQKGQISVEGFARYL
NGEENSIIPPEKLDQSEDMTLPLSHYFINSSHNTYLTAGQLAGNSSVEMYKQVLLSGCRC
IELDCWKGRTTEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPVILSFENHVDSPK
QQAKMAEYCRSIFGDALLTEPLEKYPLESGVPLPSPMELMGKILVKNKKKHHKPDGSTKK
KLSEQVSNTYSDSSSVCEPSSPSAGSTKEEMADSSQPAEGAELSLRPQGRKSIGEVEAES
EDDDDDDDDCKKGSMDEGTAGSEASATEEMSNLVTYIQPVKFNSFEGSKKINRSFQMSSF
VETKALEQLTKSPVEFVEYNKLQLSRIYPKGTRVDSSNYNPQLFWNAGCQLVALNFQTID
LSMQLNLGMYEFNGKCGYRLKPEFMRRPDKHFDPFTESTVDGIVANTLSVKIISGQFLTD
KKVGTYVEIDMFGLPVDTKRKAFKTKTSQGNAINPVWEEEAIVFKKVVLPTLASLRIAVF
EEGGKFIGHRIIPVSAIRPGYHYINLRNEKNQALTMPALFVYVEVKDYVPDTFADVIEAL
SNPIRYVNLMEQRANQLAALTLEEGGEEEGDKEVEAGSDAPSESKVDQRVALPAENGLSH
TPIIAPKQPSLVGHQPQSAGSLKPSVKTEDIIQSVLTDLEAQTVEELKQQKGFVREQRKQ
YKEMKELVRKHHRKTSELIKEHTARVSELQSQHQRRRSTLQKSHKRDGKKSRSEHSLSTL
DQELCELELECSQKLAELKEQQQQQLLTLRQEQYYSEKYQKREHIKQLVEKLTTIAEECQ
NAQLKKLRDVCEKEKKDIKKKMDKKRQEKINEAKSKDKNVTEEEKLEINRSFVNEVVQYI
KRLEDAQSKRQERLLEKHKDIRQQILDERPKLQSDLDQEYQDKFRRLPVEIQEFVQDSGK
AKYSDDSIHGNLVVSPTTEKLNNKASHSEDDMEEGSSERVYDTPL
NT seq 3738 nt   +upstreamnt  +downstreamnt
atggcaggggcacagcctggagttcatgcgctgcagctcaagccagtgtccgtgccagag
agcctaagaaagggcaacaaatttatgaaatgggatgatgattctaccactgtgaccccg
gtgactctaactgtcgaccccaaaggttacttcctgtattggaccgaccagaacaaggat
acagacctactggatatagcatacataaaagatgccaggaatggaaaatacaccaaaacg
ccaaaggaagccaagctgcgtgagctactggatgtcagcacacttgcggggaagatggag
aacaggatgctgacagtggcgagcggtccagacatggtcaacatcacctatctgaacttt
atggcctttcaggaggagacggctaaggaatgggcagaagagctgttcagcctggcatcc
aacctgttcgtacagaacatgtccagagaggcctgtcttgagaaggcatacactcgaatg
aaactgcagctcaaccctgaggggcgaatccctgtcaagaatatcttcaggatgttctca
gcagacaggaagcgagtggagacagccctggaaaactgtagcctcccttctggaagaaat
gactccatccctcaagaagacttcactccagaggtttatactatgttcctgaacaacatt
tgtccccggtctgagctggaccacatcttctctgacgtgggggctaagagtcgtccatac
ctcagtgtggagcagatgacagaattcatcaacaataaacaacgagaccctcgtctgaat
gagattctctaccctcctctcaaaccagaacaggtccagctgctggtggacaaatacgaa
cccaatacctcgctggcacagaaaggtcagatctcggtggagggcttcgccaggtatctg
aacggtgaggaaaacagcatcattccccccgagaagctggaccagagtgaagacatgact
ctgcccctctcccactatttcatcaactcatcacacaacacatacctcacagctggccag
ctcgcaggaaactcttcagtggagatgtacaaacaggttctcctgtcagggtgccgctgc
attgaactggactgctggaagggtcgcaccacagaagaagagcctgtcatcactcacggc
ttcaccatgacaacggaaatctccttcaaggaggtgatcgaggctattgcagagtgtgcc
ttcaagacctcgcccttccccgtcatcctgtcttttgagaaccatgtggactcaccgaag
cagcaggccaagatggcagagtactgccggtcaatatttggagacgcattactgacagaa
cctctagagaaatatcctctggaatctggtgttccgcttcccagcccgatggaactgatg
gggaagatcttggtgaagaacaagaagaaacatcacaagccagatggaagcaccaagaag
aaactgtccgagcaggtttcaaacacctacagtgattcttccagcgtgtgtgagccctcc
tctccgagtgcaggttcaaccaaagaggagatggcagattcctcgcagcctgctgagggt
gctgagctcagcctgaggccgcagggcaggaagtctattggtgaggtggaggcagagagc
gaggatgatgacgatgatgatgacgactgtaaaaagggttcaatggacgagggtacagca
ggcagtgaggcatctgctacagaggaaatgtccaacctggtcacctacatccagccagtc
aagttcaacagctttgagggttccaaaaagatcaatcgcagcttccagatgtcgtccttt
gtagagacaaaagccttggagcaactgactaaatctcctgtggagtttgtggagtacaac
aagttgcagctgagcaggatctaccctaaaggcaccagagtggattcatccaactataac
cctcagcttttctggaacgctggctgtcagctggtggctctcaacttccagaccatcgat
ttgtcaatgcagctgaacttgggcatgtatgagttcaatggaaaatgtggctatagactg
aaacctgagttcatgaggcggccagacaaacactttgatcctttcactgagagcacagtg
gatgggatagtagccaacactctgtctgtgaagatcatctcaggccagttcctgactgat
aagaaagtaggcacatacgtggagatcgacatgtttggcttaccggtggacaccaagagg
aaagctttcaagaccaagacatctcagggcaatgccatcaaccccgtctgggaagaggag
gccattgtcttcaaaaaggttgttctgcccacattggcttcattaaggatagcagtgttt
gaagaaggagggaagtttatcggccaccgtattatccctgtgtcagccatccgtccaggc
tatcattacatcaatctaaggaatgagaagaaccaggcgctgacgatgccggctctgttt
gtgtatgtagaagttaaggattatgtccctgacacatttgcagatgtcatcgaagccttg
tccaatcccatccgctatgtcaacctgatggagcagagagccaatcagttagctgctctc
actttggaggaggggggagaagaggagggtgacaaagaggtggaagcaggaagcgatgcc
ccctcagaatctaaagtggaccagagggtagcattgcctgcagagaatggactgagccac
acacccatcatcgcccccaaacaaccttcactggttggccaccagcctcagtctgcaggc
tctctgaaaccttcagtgaagactgaagacatcattcagagtgtcctcactgatttggag
gctcagacagtggaggagttgaagcaacagaagggctttgttcgagagcagaggaagcag
tacaaggagatgaaggagctggttcggaaacaccaccgcaagaccagcgagctgatcaag
gagcacacagctcgtgtttctgagctacagagtcaacatcagcgtcggcgttccaccctg
cagaagagccacaaacgagatggtaagaaaagccgatccgagcactctctgtcaaccctg
gatcaggagctgtgtgagctggaactagagtgtagccagaagctggcagaactgaaggaa
cagcagcagcaacagctcctcacacttcgccaggagcagtactacagcgaaaagtaccag
aaacgagaacacatcaagcagctggttgagaagttgaccactatagcagaagagtgccag
aatgctcagctgaaaaagctcagagatgtctgtgaaaaagaaaagaaggatattaaaaag
aaaatggacaagaaaaggcaagagaagatcaatgaagccaaatccaaagacaagaatgtg
acagaagaagagaagctagagatcaacagatcctttgtgaatgaggtggtgcagtacatc
aaacggttggaagatgcacagagtaaaagacaagagagattattggagaagcacaaggac
atccgccaacaaattttggatgaaaggccaaagctacagagcgatctggaccaggagtac
caggacaaatttcgccgactacctgtggagatccaagaatttgttcaggacagcggcaaa
gccaagtatagcgacgatagcatccatgggaaccttgtggtttccccgacaacggagaag
ctaaacaacaaggcatcgcactcggaggacgacatggaggagggctcatcggaacgagtc
tacgacacgcctctttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system