KEGG   Sinorhizobium kummerowiae: PZL22_000158
Entry
PZL22_000158      CDS       T09063                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
skm  Sinorhizobium kummerowiae
Pathway
skm00521  Streptomycin biosynthesis
skm00523  Polyketide sugar unit biosynthesis
skm00525  Acarbose and validamycin biosynthesis
skm00541  Biosynthesis of various nucleotide sugars
skm01100  Metabolic pathways
skm01110  Biosynthesis of secondary metabolites
skm01250  Biosynthesis of nucleotide sugars
Module
skm_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:skm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PZL22_000158 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PZL22_000158 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    PZL22_000158 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PZL22_000158 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    PZL22_000158 (rfbB)
Enzymes [BR:skm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PZL22_000158 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short KR BDHCT Gp_dh_N
Other DBs
NCBI-ProteinID: WHS91580
UniProt: A0ABY8T1F8
Position
pSkuCCBAU71714b:194548..195618
AA seq 356 aa
MRVLVTGGAGFIGSAVCRHLIRNGAERVVNVDKLTYAGSLASLRAVESDPHYAFYRADIR
DEQVLLQIMRREGIDAIMHLAAESHVDRSIESPEPFMETNVLGTVRLLNAALAYWSGLGT
EERGRFRFHHVSTDEVFGDLPFNRGIFSEETRYAPSSPYAASKAAADHFARAWYHTYGLP
VVVSNCSNNYGPFHFPEKLIPLTIINAAEEKPLPLYGSGANVRDWLHVDDHATALELVVS
RGRPGESYNIGARAERNNLSVMESICDLLDVRLPRKGGDSYRDLITLVPDRPGHDRRYAI
DPSKAERELGWRPKRSFEGGLSETVDWFLANRWWWEPIRRERYSGTRIGEQHRSVA
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcgagttttggtaacgggtggcgcaggtttcattggatcggcggtttgccggcacctg
atccgaaacggagccgagcgcgtcgtcaatgtcgacaagctgacctatgccggcagcctt
gcatcgttacgggcagtggaaagcgatccgcactatgctttctaccgggccgatatccgc
gacgaacaggttctgctccagatcatgcgccgggaggggatcgatgcgatcatgcatctt
gctgccgagagccatgtcgaccgctcgatcgagagccccgagccatttatggagaccaac
gtcctcggcaccgtgcgattgctcaacgccgcgctggcctactggtcggggctcggcacc
gaggagcgggggcgcttccggtttcaccatgtctcgaccgacgaagtcttcggcgacctt
ccgttcaaccgcgggattttttccgaggagacgcgctacgcaccctcgtccccttacgcg
gcttctaaagcagcggcggatcacttcgcacgtgcgtggtaccacacctatggtcttccg
gtggtggtctcgaactgctccaacaattacggcccgttccattttcccgagaagctgatc
cccctgacgatcatcaatgccgcagaggagaagccgttgccgctctacggctcgggagcg
aatgtccgcgattggctccatgtcgatgatcatgcgactgcgctggaactggtcgtcagc
cggggcaggccaggggagagctacaatatcggcgcccgtgccgagcgcaacaatctgtcg
gtcatggaaagcatctgcgatctgctcgacgtccggttgccacgaaagggcggtgacagc
tatcgggacctcatcactcttgtccccgaccggcccggccacgaccggcgctatgcgatc
gatccctcgaaggccgagcgtgagcttggctggaggccgaagcggagcttcgagggcggg
ctgagcgagactgtcgactggttcctcgcaaacaggtggtggtgggagccgatccggcgc
gagcgctattccggcacccgcatcggcgagcagcatcggagcgttgcgtga

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