KEGG   Silene latifolia (white campion): 141591308
Entry
141591308         CDS       T11116                                 
Name
(RefSeq) pre-mRNA-splicing factor cwc22-like
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
slaf  Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slaf03041]
    141591308
Spliceosome [BR:slaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    141591308
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    141591308
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 141591308
NCBI-ProteinID: XP_074267733
Position
7:complement(118821219..118823668)
AA seq 506 aa
MTPYIPPSKRASQVIGDSESEEYQRLTWEALRHSINALLNKVNTNNIKNVIPELFSENLI
RGRGLFCRYTIKSQLISPQFTPIFAAIVAVVNSKFPEIGNLLVKRVVLQLKNAYNRNDKP
RLVAAVKFIAHLVNQRVTHEIVALELITLLLENPSDDSVHVAVEFVKECGSVLQDVCPKS
THAVFDRFRGILHEGEIDKRVQFMIEDLFAVRRASFRGYPAVQPELDLVDLEDQFTHEIS
LNDEIDPETYLDVFRHGSDFTEGERKYEEIKMSMLGDDLDQDVEDTDTGSCDSDSVDDIE
DVTNTNLVELRRTIYLTIMSGAQFEEVGHKLLKIKLEAGEEIELCMMILECCSQEKTYVR
LYGLLAQRFCMINKVYQENFEKCFVQQYSMIHRLETNKIRNVASLFAHLLATDALPWHIL
SYIRLTEEDTTSSSRIFIKFLFQELAEHMGIPLLCQRLSDPSMTHSFQSIFPKDHPRNTR
FAILFFSSIGLDGLTYNLREHLRRPI
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgacgccatatattccgccatcgaagcgtgcatcccaagtaatcggagatagtgaaagt
gaggaataccagagattgacatgggaagcccttcgtcacagcatcaatgccttgctcaac
aaggttaataccaacaacattaagaacgttatccccgagttgtttagcgagaatctcata
aggggtaggggcttattttgccgatacactatcaaatcccaattaatatcgcctcaattt
actcctatcttcgcggctattgtggccgttgtcaattcaaagttccctgaaatcggaaac
cttcttgtcaaacgagtcgttttgcagctaaaaaacgcctacaaccgtaatgataagcct
cgactcgttgcagctgttaaattcattgcgcacttggtaaaccaacgagttactcacgag
attgttgctttggagctgattacgcttctgctagagaacccttctgatgatagcgttcac
gttgcagttgagtttgtcaaagaatgtggttccgttcttcaagacgtttgtcctaagagt
acgcacgctgtctttgatcgctttagagggatattgcacgaaggagaaattgacaagagg
gttcagtttatgatcgaggatttattcgctgtcagaagagcgagttttagaggttatcct
gcagttcagcctgaattagatctcgtcgacttagaagatcagtttactcatgagatatcc
ctgaatgacgagattgatccagagacctatctcgatgttttcaggcatggttcagatttc
acggaaggtgaaaggaaatatgaagagattaagatgtcgatgctaggagacgacttggat
caggatgtggaagatactgacactggttcgtgtgattctgattcagttgatgatattgaa
gatgttacaaatacaaaccttgtagaactccgtagaactatatatctgacaattatgtct
ggtgctcaatttgaagaggtcggacataagctattgaaaataaagctggaagcgggggaa
gaaatcgagctgtgtatgatgatattggaatgctgcagccaagaaaagacttatgttcga
ctttacggactgttggctcagagattctgtatgatcaataaagtctaccaagagaatttt
gagaaatgttttgtgcaacaatattcaatgattcatcgtctagagacaaacaagatacgt
aatgtggccagcttgtttgctcatttgctggcgactgatgctcttccgtggcatatctta
agttacatcaggctaacagaggaggatacgacatcctcatcccgcatcttcatcaagttc
cttttccaggagttggcagaacacatgggtatcccgttactctgtcaacgcctcagtgat
ccatccatgacacattcgttccagtctattttccctaaagatcacccaaggaacacccgc
tttgccatcttgttcttctcgtcgattggccttgatggattaacttacaacttgagagaa
caccttagacgacctatctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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