KEGG   Solanum lycopersicum (tomato): 101245025
Entry
101245025         CDS       T02665                                 
Name
(RefSeq) AP-2 complex subunit alpha-1-like isoform X1
  KO
K11824  AP-2 complex subunit alpha
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04142  Lysosome biogenesis
sly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101245025
   04142 Lysosome biogenesis
    101245025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101245025
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    101245025
Membrane trafficking [BR:sly04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    101245025
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101245025
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 RRN3
Other DBs
NCBI-GeneID: 101245025
NCBI-ProteinID: XP_010313320
Position
11:57946302..57964496
AA seq 1020 aa
MALSGMRGLSVFISDVRNCQNKEQERLRVDKELGNIRTRFKNEKGLTPYEKKKYVWKMLY
IHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLRLAINTVRNDIVGRN
ETFQCLALTLVGNIGGREFAESLAPDVQKLLISSSCRPLVRKKAALCLVRLFRKNPDVMN
VDSWSDRMAQLLDERDLGVVTSSMSLLVALVSNNHEEYWSCLPKCVKVLERLSRNQDVPQ
EYTYYGIPSPWLQVKAMRALQYFPTIEDPDTRRSLFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFVMREELSLKIA
ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAALKAREYLDK
PAIHETMVKVSAYILGEYSHLLARRPGCSPKEIFSIIHEKFPTVTTSTIPILLSTYAKIL
MHTQPPDPELQNQIWAIFRKYEGCIDVEIQQRAVEYFELSKKGAALMDILSEMPKFPERQ
SSLIKKAEDTETDTADQSAIKLRAQQQNSNALVVTDQHHANGTPPVNQLGPVKVPSTSNV
DCDSVDQREAQSNGTLTIVDPQPPSSASPDLLGDLLSPLAIEGPHSAENQSNHSLSAGVE
GAAIVEEALALAPIEEQMNTIQPIGSIAERFHALCFKDSGVLYEDPYIQIGSKADWRAHH
GRLVLFLGNKNTAPLASVQAIILSPSHLRTELSLVPETIPPRAQVQCPLEVVNLRPSRDV
AVLDFSYKFGTHLVNVKLRLPAVLNKFFQPITVAAEEFFPQWRSLSGPPLKLQEVVRGVR
PMALLEMANLFNSFQLIVCPGLDPNPNNLVASTTFYSESTRAMLCLVRIETDPADRTQLR
MTVASGDPALTFELKEFVKEQLVSIPTAARAAAPPVPPQPQPTSPPPPTSDPGALLAGLL
NT seq 3063 nt   +upstreamnt  +downstreamnt
atggcgttatctggcatgagaggattgtcggtgttcatcagcgacgttcgtaattgtcag
aacaaagaacaggaacgccttcgtgttgataaagagctcggcaacattcgaactcgcttt
aagaacgaaaagggcttgacaccatatgaaaagaagaaatatgtctggaaaatgctgtat
attcatatgctaggttatgatgtggacttcggtcacatggaagctgtatctctgatttct
gctccaaagtatcctgagaagcaggttggatatatagtgacatcatgtttgctcaatgag
aatcatgattttttgagattagcaattaatactgtacgcaatgacatagtcggacgcaat
gagactttccagtgtctagcgttgacattggttggaaatatcggggggagggaatttgca
gaatctctagctcctgatgttcaaaagttacttatatcaagcagttgtaggccactggtg
aggaagaaagctgcactatgtctcgtacgtcttttcaggaaaaatcctgatgtcatgaat
gtagatagctggtcagatcggatggcacaactgctagatgaacgagatttaggtgttgtg
acatcttccatgagccttctagttgcattagtgtcaaataaccacgaagaatattggagt
tgtcttcccaaatgtgttaaagtattggaaaggctttcaaggaaccaagacgtaccacaa
gaatatacctactatgggattccatctccatggctgcaggtaaaggctatgagggctcta
caatattttcctactattgaggatccagatactagaagatcattgtttgaggttttgcaa
cggatattgatgggaaccgatgtggtgaaaaatgtgaacaagaacaatgcgtcacatgct
gtcctctttgaagcgcttgctcttgtcatgcatcttgatgccgaaaaagagatgatgtct
cagtgtgttgcattgcttgggaaattcattgctgtacgtgagccaaatattcgctatctt
ggtttggaaaatatgactcggatgttgatggttacagatgtacaggacatcattaaaaga
catcaagcacagattattacctcactgaaggatcctgatatcagtataaggagacgtgcg
cttgatttactatatggaatgtgtgatgtttcaaatgcaaaagacatagtggaagaactg
ttgcagtatcttagtacagcagagttcgtgatgcgtgaagaactgtcgctcaaaattgca
attcttgcagagaaatttgctcctgatttgtcatggtatgtagatgtcatccttcaatta
attgacaaggctggtgatttcgtcagtgatgacatttggttccgtgttgtgcaatttgtt
acaaacaatgaagatctacagccttatgcagctttgaaggccagagaatatcttgataaa
cccgccattcatgaaacgatggtcaaggtcagtgcatatatccttggagaatacagccat
cttctggccagaaggcctggatgtagtccaaaggaaatctttagtatcattcatgagaag
ttccctactgttacgacttcaacaattcctattcttctgtcaacatatgctaagatcttg
atgcatacacagccaccagatccggagctacagaatcagatttgggcaatattcaggaag
tatgaaggctgcatcgatgtagagatacagcaacgggctgtggaatacttcgagttgagt
aagaaaggtgcagctttaatggacatcttatctgaaatgccaaagttccctgagcgacag
tcgtcactgataaaaaaagctgaggatactgagactgataccgctgaccaaagtgcaatc
aagttgcgtgcacaacagcaaaattctaatgctttagtagtgacagaccaacaccatgct
aatggaactccaccagtcaaccagttaggtccagtaaaagttccaagcacgagcaatgtg
gattgtgactcagtggatcaaagggaggctcagtcaaatggaactttgaccattgtggat
cctcaacccccttcaagcgcttcgcctgatctcctgggtgatcttttaagtcctctggct
attgagggccctcactctgctgagaaccaatctaaccatagtttaagtgctggtgttgaa
ggtgctgcaattgtggaggaggcgctagcacttgcacctattgaagaacagatgaacacc
atccagccaataggaagcattgcagaaaggtttcatgccttgtgctttaaagatagtggt
gtactatatgaggatccatacattcagattggctcaaaagcagattggcgggcacatcat
ggacgacttgtcctgttcttgggaaataagaatacggctccgcttgcttcagtgcaggct
ataatattgtctccatctcatttgaggacggaactatcattagtacctgagactattcca
ccacgtgcacaggttcaatgcccacttgaagttgttaacctacgtccaagtagggatgtc
gctgttcttgacttctcatacaagttcggaactcatttggttaatgtcaaacttcgcctc
cctgctgtcttgaataagtttttccagcctatcacagtagctgcagaagaatttttccca
caatggagatcactatctggaccaccattgaagctccaagaagtggttagaggtgtaaga
ccaatggcacttcttgaaatggcaaacttgttcaatagtttccagttgattgtttgtcct
ggacttgatccaaatccaaataatttggttgctagcacaactttctattcagagagtacg
cgagccatgttgtgtttggttagaatagaaacagatccagctgatagaactcaactgcgt
atgacagttgcttctggagatcctgcactgacattcgagttgaaggagttcgttaaagaa
caattggttagtatccctacagctgctcgggcagcagcaccacctgtacctccacaacct
cagccaacaagtccaccaccgccaacatcagatcctggagcattgcttgctggtttgcta
taa

  All links  
Gene (9)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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