KEGG   Streptomyces avermitilis: SAVERM_1817
Entry
SAVERM_1817       CDS       T00126                                 
Symbol
sucD1
Name
(GenBank) putative succinyl-CoA synthetase alpha subunit
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
sma  Streptomyces avermitilis
Pathway
sma00020  Citrate cycle (TCA cycle)
sma00640  Propanoate metabolism
sma00660  C5-Branched dibasic acid metabolism
sma01100  Metabolic pathways
sma01110  Biosynthesis of secondary metabolites
sma01120  Microbial metabolism in diverse environments
sma01200  Carbon metabolism
Module
sma_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sma_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:sma00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    SAVERM_1817 (sucD1)
   00640 Propanoate metabolism
    SAVERM_1817 (sucD1)
   00660 C5-Branched dibasic acid metabolism
    SAVERM_1817 (sucD1)
Enzymes [BR:sma01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     SAVERM_1817 (sucD1)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2
Other DBs
NCBI-ProteinID: BAC69528
NITE: SAV1817
UniProt: Q82M43
Position
complement(2225284..2226183)
AA seq 299 aa
MAIYLTKESKVLVQGMTGGEGMKHTRRMLAAGTDVVGGVNPRKAGRAVDFDERTVPVFGS
VREGREATGADVTVVFVPPAFAKAAVVEAADAGIALTVVITEGIPVHDAVAFHAYAAAKG
TRIIGPNCPGLISPGQSNAGIIPADITKPGRIGLVSKSGTLTYQLMYELRDIGFSTCVGI
GGDPVVGTSHIDCLAAFEADPDTELIVLIGEIGGDAEERAAAYVRDHVTKPVVGYIAGFT
APEGRTMGHAGAIVSGSSGTARAKKEALEGAGVQVGGTPTATARLVLARLEAERDVTHS
NT seq 900 nt   +upstreamnt  +downstreamnt
atggccatctacctcaccaaggagagcaaggtcctcgtccagggcatgaccggcggcgag
ggcatgaagcacacccgccgcatgctcgcggcgggcacggacgtcgtcggcggggtcaac
ccgcgcaaggcgggccgtgccgtcgacttcgacgagcggaccgtccccgtgttcggctcg
gtgcgcgagggaagggaggcgaccggcgccgacgtcaccgtcgtcttcgtaccgcctgcc
ttcgccaaggcggccgtcgtcgaggccgccgacgccggaatcgcgctcaccgtcgtcatc
accgagggcatcccggtccacgacgcggtcgccttccacgcgtacgccgccgccaagggc
acccggatcatcggccccaactgccccggcctgatctcccccggccagtccaacgcgggc
atcatccccgccgacatcaccaagcccggccgcatcggcctcgtctccaagtccggcacc
ctcacctaccagctcatgtacgagctgcgcgacatcggcttctcgacgtgcgtcggcatc
ggcggggacccggtcgtcggcacgagccacatcgactgcctggccgccttcgaggcggac
cccgacaccgaactcatcgtcctgatcggcgagatcggcggcgacgcggaggaacgggcg
gccgcgtacgtccgcgaccacgtcaccaagcccgtcgtcggctacatcgccggattcacc
gcccccgagggcaggaccatggggcacgcgggggcgatcgtgtccggttcgtccggcacc
gcgcgggcgaagaaggaggccctggagggcgcgggcgtgcaggtgggcggcacgccgacc
gcgacggcacggctggtgctggcccgactggaagcggagcgtgacgtcactcatagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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KEGG   Streptomyces avermitilis: SAVERM_1818
Entry
SAVERM_1818       CDS       T00126                                 
Symbol
sucC1
Name
(GenBank) putative succinyl-CoA synthetase beta subunit
  KO
K01903  succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Organism
sma  Streptomyces avermitilis
Pathway
sma00020  Citrate cycle (TCA cycle)
sma00640  Propanoate metabolism
sma00660  C5-Branched dibasic acid metabolism
sma01100  Metabolic pathways
sma01110  Biosynthesis of secondary metabolites
sma01120  Microbial metabolism in diverse environments
sma01200  Carbon metabolism
Module
sma_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sma_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:sma00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    SAVERM_1818 (sucC1)
   00640 Propanoate metabolism
    SAVERM_1818 (sucC1)
   00660 C5-Branched dibasic acid metabolism
    SAVERM_1818 (sucC1)
Enzymes [BR:sma01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     SAVERM_1818 (sucC1)
SSDB
Motif
Pfam: ATP-grasp_2 Ligase_CoA ATP-grasp_5 GARS_A HTH_IclR
Other DBs
NCBI-ProteinID: BAC69529
NITE: SAV1818
UniProt: Q82M42
Position
complement(2226195..2227325)
AA seq 376 aa
MDLYEHQARELFADHGILVPRAEVTDSSQEARVIARRLGGRVVVKAQVKTGGRGKAGGVK
LAADPAAAELTARQILGMDIKGHTVGKVMLAEPVDIEAEFYVSYVLDRAAGRFLAIASAE
GGMEIEEVAATRPEAVARVPVDPAEGVTSAKAAEIAEAAGLPPATVDVLVRLWEVLLRED
AVLVEVNPLVRTAQGQILALDGKVTLDDNARFRQTRWGAEAAEHGDQLEAAAAAKGLNYV
KLDGEVGIIGNGAGLVMSTLDVVAGCGARPANFLDIGGGASAQIMADGLSVILSDPAVKS
VFVNVFGGITACDAVADGIVQALDTVRLTKPLVVRLDGNNAARGRAILDGRRHPLVQQVT
TMDGAARRAAQLADAG
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggacctgtacgaacaccaggcaagggaactcttcgcggaccacggcatcttggtgccg
agggccgaggtcaccgactcgtcccaggaggcgcgcgtcatcgcccgcaggctcggcggc
cgcgtcgtagtgaaggcgcaggtcaagaccggtggccgcggcaaggcgggtggtgtgaag
ctcgccgcggaccccgccgccgccgaactcacggcgcgccagatcctcggcatggacatc
aagggacacacggtcggcaaggtgatgctggccgaacccgtcgacatcgaggcagagttc
tacgtctcctacgtactcgaccgcgcggccggccgcttcctcgccatcgcctccgcggaa
ggcggcatggagatcgaggaggtggccgccacccgcccggaagccgtggcgcgtgtcccc
gtcgacccggccgagggtgtcacctccgcgaaggcggccgagatcgcggaagcggccggg
cttcccccggcgaccgtcgacgtactcgtccggctctgggaggtactgctccgcgaggac
gccgtactggtcgaggtgaacccgctcgtgcgtacggcgcaggggcagatcctcgccctc
gacggcaaggtcacgctcgacgacaacgcccgcttccggcagacgcgttggggcgccgaa
gccgcggagcacggcgatcagctggaggcggcggcagcggccaaggggctcaactacgtg
aagctggacggcgaggtcggcatcatcggcaacggagcgggcctcgtcatgtcgacgctc
gacgtggtcgcgggctgcggggcccgccccgccaacttcctcgacatcggcggcggcgcc
tccgcccagatcatggccgacggcctgtccgtcatcctctccgacccggccgtgaagtcc
gtcttcgtcaacgtcttcggcgggatcaccgcctgcgacgcggtcgccgacgggatcgtg
caggccctggacaccgtccggttgaccaagccgctcgtggtccgcctggacgggaacaac
gcggcacgggggcgggcgatcctcgacggccgccggcaccccctggtccagcaggtcacc
accatggacggcgccgcgcgccgcgccgcccaactcgccgacgccggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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KEGG   Streptomyces avermitilis: SAVERM_3451
Entry
SAVERM_3451       CDS       T00126                                 
Symbol
sucD2
Name
(GenBank) putative succinyl-CoA synthetase alpha subunit
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
sma  Streptomyces avermitilis
Pathway
sma00020  Citrate cycle (TCA cycle)
sma00640  Propanoate metabolism
sma00660  C5-Branched dibasic acid metabolism
sma01100  Metabolic pathways
sma01110  Biosynthesis of secondary metabolites
sma01120  Microbial metabolism in diverse environments
sma01200  Carbon metabolism
Module
sma_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sma_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:sma00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    SAVERM_3451 (sucD2)
   00640 Propanoate metabolism
    SAVERM_3451 (sucD2)
   00660 C5-Branched dibasic acid metabolism
    SAVERM_3451 (sucD2)
Enzymes [BR:sma01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     SAVERM_3451 (sucD2)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2 DapB_N
Other DBs
NCBI-ProteinID: BAC71163
NITE: SAV3451
UniProt: Q82HQ7
Position
complement(4274601..4275485)
AA seq 294 aa
MAIFLNKDSKVIVQGMTGATGMKHTKLMLADGTNIVGGVNPRKAGTSVDIDGTDIPVFGS
VAEAIEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFWAYAKSKG
NKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRDIGFSSAV
GIGGDPIIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAADFIAKNVTKPVVGYVAG
FTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLARAILGS
NT seq 885 nt   +upstreamnt  +downstreamnt
atggctatcttcctcaacaaggacagcaaggtcatcgtccagggcatgaccggtgccacg
ggcatgaagcacaccaagctcatgctggccgacggcacgaacatcgtcggcggtgtgaac
ccgcgcaaggcgggcacgtccgtcgacatcgacggcaccgacatcccggtgttcggctcg
gtagccgaggccatcgagaagacgggcgccaacgtgtccgtcctcttcgtgccgccggct
ttcgccaaggccgccgtcgtcgaggccatcgacgcggagatccccctcgcggtcgtcatc
accgagggcatcgccgtccacgactccgccgccttctgggcgtacgcgaagtcgaagggc
aacaagacccgcatcatcggcccgaactgccccggtctcatcacgccgggccagtcgaac
gccggcatcatcccgggcgacatcacgaagccgggccgcatcggcctggtctcgaagtcc
ggcacgctgacgtaccagatgatgtacgagctccgtgacatcggcttctcgtcggccgtc
ggcatcggtggcgacccgatcatcggtacgacgcacatcgacgcgctcgccgcgttcgag
gccgaccccgacaccgacctgatcgtcatgatcggtgagatcggcggcgacgccgaggag
cgtgcggcggacttcatcgcgaagaacgtgacgaagccggtcgtcggctacgtcgccggc
ttcaccgcgcccgagggcaagaccatgggccacgccggcgccatcgtctccggctcctcc
ggcacggccgccgcgaagaaggaggccctcgaggccgccggcgtcaaggtcggcaagacg
ccgaccgagacggcgaagctggcgcgcgccatcctcggcagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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KEGG   Streptomyces avermitilis: SAVERM_3452
Entry
SAVERM_3452       CDS       T00126                                 
Symbol
sucC2
Name
(GenBank) putative succinyl-CoA synthetase beta subunit
  KO
K01903  succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Organism
sma  Streptomyces avermitilis
Pathway
sma00020  Citrate cycle (TCA cycle)
sma00640  Propanoate metabolism
sma00660  C5-Branched dibasic acid metabolism
sma01100  Metabolic pathways
sma01110  Biosynthesis of secondary metabolites
sma01120  Microbial metabolism in diverse environments
sma01200  Carbon metabolism
Module
sma_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sma_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:sma00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    SAVERM_3452 (sucC2)
   00640 Propanoate metabolism
    SAVERM_3452 (sucC2)
   00660 C5-Branched dibasic acid metabolism
    SAVERM_3452 (sucC2)
Enzymes [BR:sma01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     SAVERM_3452 (sucC2)
SSDB
Motif
Pfam: ATP-grasp_2 Ligase_CoA ATP-grasp_5 GARS_A
Other DBs
NCBI-ProteinID: BAC71164
NITE: SAV3452
UniProt: Q82HQ6
Position
complement(4275507..4276685)
AA seq 392 aa
MDLFEYQARDLFAKHGVPVLAGEVIDTPEAAREATERLGGKSVVKAQVKVGGRGKAGGVK
LAATPDEAVARATDILGMDIKGHTVHKVMIAETAPEILEEYYVSYLLDRTNRTFLAMASV
QGGMDIEEVAEKTPEALAKVPVDAVEGVSIEKAREIVALAKFPAEVAEKVAEVLVTLWDT
FVAEDALLVEVNPLAKVASGDILALDGKVSLDENAEFRQADHAALEDKASANPLEAAAKE
KNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPANFLDIGGGASAQVMANGL
EIILGDPDVKSVFVNVFGGITACDEVANGIVQALQLLADKGEEVTKPLVVRLDGNNAELG
RRILSDANHPLVQRVDTMDGAADKAAELAAAK
NT seq 1179 nt   +upstreamnt  +downstreamnt
gtggacctgttcgagtaccaggcgagggacctcttcgccaagcacggtgtaccggtgctg
gccggtgaagtcatcgacacgcctgaggcggcccgcgaggcgaccgagcgtcttggcggc
aagtccgtcgtcaaggcccaggtgaaggtcggtggccgcggcaaggccggtggcgtgaag
ctcgccgccaccccggacgaggccgtcgctcgcgcgacggacatcctcggcatggacatc
aagggccacacggtccacaaggtgatgatcgccgagacggctccggagattcttgaggag
tactacgtctcgtacctcctcgaccgcaccaaccgcaccttcctcgccatggcgtccgtt
cagggcggcatggacatcgaggaggttgccgagaagacccccgaggcccttgcgaaggtc
ccggtcgacgctgtggaaggcgtctccatcgagaaggcccgcgagatcgtcgccctggcg
aagttcccggccgaggtcgccgagaaggtcgccgaggtcctcgtgaccctgtgggacacc
ttcgtcgccgaggacgcgctcctcgtcgaggtcaacccgctcgccaaggtcgcctccggc
gacatcctggcgctggacggcaaggtctccctggacgagaacgccgagttccgccaggcc
gaccacgccgccctcgaggacaaggcgtcggccaacccgctcgaggccgccgccaaggag
aagaacctcaactacgtcaagctcgacggcgaggtcggcatcatcggcaacggcgcgggt
ctcgtcatgagcaccctcgacgtcgtcgcgtacgctggtgagaaccacggcggagtcaag
cccgccaacttcctcgacatcggcggcggcgcttccgcgcaggtcatggccaacggtctc
gagatcatcctcggtgacccggacgtcaagtccgtcttcgtcaacgtcttcggtggcatc
accgcctgtgacgaggtcgccaacggcatcgtgcaggcgctgcagctgctcgccgacaag
ggcgaggaagtcaccaagccgctggtcgtgcgtctcgacggcaacaacgccgagctgggc
cgcaggatcctgtcggacgccaaccacccgctggtccagcgcgtggacaccatggacggc
gcggccgacaaggccgccgagctcgcggctgcgaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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