KEGG   Scophthalmus maximus (turbot): 124850044
Entry
124850044         CDS       T09850                                 
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain isoform X1
  KO
K07375  tubulin beta
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04145  Phagocytosis
smau04517  IgSF CAM signaling
smau04540  Gap junction
smau04814  Motor proteins
smau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    124850044 (tubb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    124850044 (tubb5)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    124850044 (tubb5)
  09142 Cell motility
   04814 Motor proteins
    124850044 (tubb5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124850044 (tubb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smau03036]
    124850044 (tubb5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smau04812]
    124850044 (tubb5)
   04147 Exosome [BR:smau04147]
    124850044 (tubb5)
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124850044 (tubb5)
Cytoskeleton proteins [BR:smau04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124850044 (tubb5)
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124850044 (tubb5)
  Exosomal proteins of colorectal cancer cells
   124850044 (tubb5)
  Exosomal proteins of bladder cancer cells
   124850044 (tubb5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 124850044
NCBI-ProteinID: XP_047188410
Position
1:14379941..14384892
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEDDA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacatccaagccggccagtgcggtaaccagattggtgccaagttc
tgggaagtgatcagcgatgagcatggcatcgatcccactgggacttaccacggagacagt
gacctgcagctcgacaggatcagtgtttactataatgaggcaacaggaggtaaatatgtg
cctcgagcaattctggtggacttggagcctggaaccatggactctgtgaggtctggaccc
tttgggcagatcttcagacctgacaactttgtttttggtcagagtggtgctggaaacaac
tgggccaagggtcactacacagagggagctgaattggtggactcggtcctggatgtggtc
cgcaaagagtcagaaagctgtgactgcctgcagggcttccagctcacacactctctcggt
ggtggaactggatctggtatgggaaccctgctcatcagcaagatccgtgaggagtacccc
gaccgtatcatgaacaccttcagtgtggtgccttcccccaaggtgtctgacacagtggtt
gagccttacaatgccaccctgtcagtccaccagcttgtagagaacacagacgaaacctac
tgcattgacaacgaagctctgtacgacatctgcttccgcactctcaaactgaccacaccc
acctatggagaccttaaccaccttgtgtccgctaccatgagtggggtcaccacctgcttg
cgcttccctggtcagctcaacgctgatctccgcaaactggccgtcaacatggtgcctttc
cctcgtttacacttcttcatgcctggcttcgccccactgaccagcaggggcagccagcag
taccgtgcccttacagttcccgagctcacacagcaggtgtttgatgccaagaatatgatg
gccgcatgcgacccacgtcatggccgctatctgaccgttgccgctgtgttccgtggccga
atgtccatgaaggaggttgacgagcagatgcttaacgtgcagaacaagaacagcagttac
tttgtcgaatggatccccaacaatgtaaagaccgctgtctgtgacattccaccacgtggc
ctcaagatggctgtcaccttcattggtaacagcacagccatccaggagctgttcaagcgc
atctccgagcagttcacagccatgttccgtcgcaaggccttcttgcactggtacacaggt
gaaggtatggatgaaatggagttcactgaagcagagagcaacatgaatgatctggtgtct
gagtaccagcagtaccaggatgccactgctgaggaagagggtgaatttgaggaggaggct
gaagatgatgcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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