KEGG   Sinorhizobium medicae: Smed_3220
Entry
Smed_3220         CDS       T00555                                 
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
smd  Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:smd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smd03032]
    Smed_3220
   03400 DNA repair and recombination proteins [BR:smd03400]
    Smed_3220
Enzymes [BR:smd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Smed_3220
DNA replication proteins [BR:smd03032]
 Prokaryotic type
  DNA Topoisomerases
   Smed_3220
DNA repair and recombination proteins [BR:smd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Smed_3220
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert Toprim_4 HATPase_c_3 UFD1_N2
Other DBs
NCBI-ProteinID: ABR62044
UniProt: A6UEG4
Position
3393136..3395571
AA seq 811 aa
MTEISETEAGAIAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADLVTVTLNPDGSVTVTDNGRGIPTDIHREEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVSLKLKIRRSGKIHEMSFTHGVADGPLKVTGDAGSDTGTEVTF
TPSEQTFSNIEFEFARLEHRLRELAFLNSGVRIVLTDKRHSDIRREELMYDGGLEAFVAY
LDRAKKPLVQKPVSIRGEKDGITVEVAMWWNDSYHENMLCFTNNIPQRDGGTHMAGFRAA
LTRQITSYADSSGVTKKEKVSLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALGVWLEEHPSDAKILVGKVVEAAAAREAARKARELTRRKGALDISSLPGKLA
DCSERDPAKSELFLVEGDSAGGSAKQGRSRESQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTSIGPDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPVLIERGHLY
IAQPPLYKVARGKSVQYLKDEKALEDYLINMGLEEASLELASGEVRAGQDLREVINDALR
LRSLMDGLHSRYNRSVVEQAAIAGALNVELNGQRNEYQQIAAEVARRLDVIAEETERGWA
AEVTAEGGLKLERMVRGVKEAAVLDMALIGSSDARHIDQLKSRLKEVYGAPPMLRRRDGT
QEISGPRALLDAIFAAGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVNDATDA
DGLFSRLMGDEVEPRRDFIQENALSVANLDI
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgaccgaaatttctgagaccgaagccggcgcaatcgccgaatatggtgccgattccatc
aaggtgctgaaaggcctcgatgccgtacgcaagcgcccgggcatgtatatcggcgacacc
gacgacggctcaggtttgcaccacatggtctacgaagtcgtggacaacgcgatcgacgag
gctttggcagggcacgcggatctggttacggtgacgctcaaccccgacggctccgtaacc
gtgaccgacaacggccgcggtataccgaccgacattcacagggaagagggcgtctcggcg
gcggaagtcatcatgacgcagcttcatgccggcgggaaattcgaccagaattcctacaag
gtctccggcggtctgcacggcgtcggcgtttcggtcgtcaacgccctttccgtgtcgctg
aagctcaagattcgccgttcgggcaagatccacgaaatgagcttcacccacggcgttgcc
gacgggccgctcaaagtgacgggcgacgccggcagcgacaccgggacggaggtgaccttc
acgccgagcgaacagaccttttcgaacatcgaattcgagttcgccaggctcgagcatcgc
ctgcgcgaactcgccttcctgaattccggcgtccgcatcgtgctgaccgacaagcgtcat
tctgacatcaggcgtgaggaactgatgtatgacggtggcctcgaggccttcgtcgcctat
ctcgaccgggcgaagaaaccgctcgtgcagaagccggtctcgattagaggcgagaaggac
ggcatcaccgtagaggtggccatgtggtggaacgacagctatcacgagaacatgctgtgc
ttcaccaacaacattccgcagcgtgacggcggcacgcatatggccggcttccgtgccgcg
ctcacgcgtcagatcacctcctatgccgacagttccggcgtcaccaagaaggagaaggtg
tcgctcacgggcgacgattgccgagagggcctgacggctgtgctgtcggttaaggtcccc
gatcccaagttctcttcgcagaccaaggacaaattggtgtcctccgaagtccgcccggtc
gtcgagagcctggtcaacgaggccctgggcgtctggcttgaagaacatccttccgacgcc
aagattctcgtgggaaaggtcgtcgaggccgcggccgcgcgcgaagcggcgcgcaaggcg
cgcgaactgacgcgccggaagggtgcgctcgacatctcctcgcttcccggcaagctcgcc
gattgctcggaacgcgacccggccaagtcggaactcttcctggtggagggcgactcggcg
ggcggctccgccaaacagggccgctcgcgcgaaagccaggcgatcctgccgctgcgaggc
aagatcctcaacgtcgagcgcgcgcgtttcgacaagatgctgtcgagccaggaaatcggc
acgctgatcaccgcgctcggcacgtcgatcggcccggacgagttcaatgccgacaagctg
cgctatcacaagatcatcatcatgacggatgccgacgtcgacggcgctcacatccgcacg
ctgctgctcaccttcttcttccggcagatgccggtgctgatcgagcgcggccacctctac
atcgcccagccgccgctctataaggtggcacgcggcaagtccgtccagtatctcaaggat
gagaaggcgctcgaagactacctgatcaatatgggcctggaggaggcttccctcgaactc
gcttcgggcgaggtgcgtgccggtcaggatcttcgcgaagtcatcaacgacgcgctccgg
ctgcggtcgctgatggatgggctccactcccgctacaaccgctccgtcgtggagcaggct
gcgattgccggagcgctcaatgtggaactgaacggccaacgcaacgaatatcagcagatc
gccgctgaagtcgcccgccggcttgacgtcatcgccgaggagaccgagcgcggctgggcg
gcagaggtgaccgccgagggcggcctgaagctggagcgcatggtgcgcggcgtcaaggaa
gcggctgtgctcgacatggcgctgatcggctcgtccgatgcccggcatatcgaccagctc
aagagccggttgaaggaagtctacggcgcaccgccgatgctgcgccgccgcgacggaacg
caggagatcagcggcccgcgcgctcttctggacgcgatcttcgccgccggccgcaagggt
cttaccatgcagcgctacaagggcctcggcgaaatgaacgccgagcagttgtgggaaacg
acgctcgatccgaacgttcgctcgctgctgcaggtcaaggtaaacgacgctacggatgcg
gacggtctgttctcgcgcctgatgggcgacgaagtggaaccgcggcgcgacttcatccag
gaaaacgcgctgagcgtcgccaacctcgatatctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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