KEGG   Silurus meridionalis (southern catfish): 124378001
Entry
124378001         CDS       T08004                                 
Symbol
dnm2b
Name
(RefSeq) LOW QUALITY PROTEIN: dynamin-2
  KO
K23484  dynamin 2 [EC:3.6.5.5]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04144  Endocytosis
smeo05100  Bacterial invasion of epithelial cells
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124378001 (dnm2b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124378001 (dnm2b)
   05100 Bacterial invasion of epithelial cells
    124378001 (dnm2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124378001 (dnm2b)
Enzymes [BR:smeo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.5  dynamin GTPase
     124378001 (dnm2b)
Membrane trafficking [BR:smeo04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Dynamin
    124378001 (dnm2b)
  Lipid raft mediated endocytosis
   Caveolin-mediated endocytosis
    124378001 (dnm2b)
   RhoA-dependent endocytosis
    124378001 (dnm2b)
SSDB
Motif
Pfam: Dynamin_M Dynamin_N GED PH MMR_HSR1 URGCP_GTPase
Other DBs
NCBI-GeneID: 124378001
NCBI-ProteinID: XP_046693398
Position
24:complement(1291445..1312091)
AA seq 860 aa
MGNRGMEELIPLINKLQDAFSSIGQSCNLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRG
SGIVTRRPLILQLVNNKAEYAEFLHCKGRKFVDFDEVRLEIEAETDRITGSNKGISPIPI
NLRVYSPNVLNLTLIDLPGMTKVAVGDQPQDIEFQIRDMLLQFIMRDSCLILAVTPANTD
LANSDALKIAKEVDPPGLRTIGVITKLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQK
DIDGRKDIRVALAAERKFFLSHPAYRHMAERMGXPFLQKTLNQQLTNHIRDTLPNLRSKL
QSQLLSLEKEVEEYKNFKPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGA
RINRIFHERFPFELVKMEFDEKELRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQIVKL
KTPCLKCVDLVVTELSALAHKCTEKLSSYPRLREETERIVTTFIRERDSKTKDQVMLLID
IELSYINTNHEDFIGFANAQQSSAVTKKRAVPNQVVRKGWLTINISIMKGGSRDYWFVLT
TESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSTKHTFAIFNIEQRNVYKDLRQIELA
CDAQEDVDSWKASFLRAGVYPEKDQVENGEGAPADTFSMDPQLERQVETIRNLVDSYIGI
VNKSIRDLMPKTIMHLMINSAKEFIHSELLAFLYSSADQSVLMEEGVDQAQHREEVLRMY
HALKEALGIISDISTTTISTPLPPPVDDTWISTDPSPHPHLKPPSSAPPPGRPPAVRGPT
PGPPPGSAPPPLVPPIPSRPGPPPVNAYGGVLEPSTAPPPQIPSRPARVPPSIPPGIPRR
PPAAPNRPTIIRPFESSLLD
NT seq 2583 nt   +upstreamnt  +downstreamnt
atggggaaccgcggcatggaggagctgattcctctcatcaacaagctccaggacgccttc
agctccatcggccagagctgtaacctggacctgccgcagatcgccgtggtcggcggccag
agcgccgggaagagctcggtgctggagaacttcgttggcagggattttcttcctcggggt
tccgggattgttactcgtagacccctcatccttcagctggtcaacaacaaagcagaatat
gctgagttcctgcactgtaaaggtcgcaagtttgtcgactttgatgaggtgcgtctggag
atcgaggccgagacggaccgcatcaccggctcgaataaaggaatctcgcccattcccatc
aacctgagagtctactctcctaatgtgctaaacctgactctgatcgatctcccgggtatg
acgaaggttgccgtcggtgaccagccacaagacatcgagttccaaataagggacatgctg
ctgcagttcatcatgagggacagctgtctgattctggccgtcactcctgccaacaccgac
ctcgccaattctgacgcactcaagatcgccaaggaggtcgaccccccaggtctgcgtacc
atcggtgtgatcaccaaactggacctgatggacgaggggacggatgcccgggatatcctg
gagaacaaactgctgcctctgcgtcgaggttacatcggtgtggtgaatcgcagtcagaag
gacattgatggacggaaggacatccgcgttgctctggcagcagagaggaagttctttctg
tctcaccctgcgtacagacacatggctgagaggatggganacccgttcctgcagaaaaca
cttaaccagcaactgaccaaccatatccgcgacacgctgcccaatctgcgcagtaaactg
cagagtcagctgctctctctggagaaggaggtggaggagtacaagaacttcaaacctgat
gacccgacacgcaaaactaaagccctgctgcagatggtgcagcagttcggtgtggacttt
gagaagaggatcgagggttctggtgatcaggtggacactctggaactttctggaggagct
cgaattaaccgcatcttccacgagcgcttccccttcgaactggtcaagatggagtttgat
gagaaggaactgagaagagaaatcagttacgcaattaagaacatccatggtgtcaggaca
ggcttgttcaccccagacctggcttttgaggccatagtgaaaaagcagatcgttaagctg
aagacgccgtgtctcaaatgtgtggacttggtcgtgactgaactctccgccctcgcccac
aagtgcacggagaagctgagttcttatcctcggctgagggaggagaccgagcggatcgtc
accaccttcattcgagagagggacagcaagactaaagaccaggtgatgctgctgattgac
atcgagctctcctacatcaacactaatcatgaggacttcattggttttgcgaacgcccag
cagagttccgctgtgacgaagaagagagccgttcccaaccaggtggtcagaaagggttgg
ctcaccatcaacatcagcattatgaagggcgggtccagggactactggttcgtcctgacc
acagagtcactgtcctggtacaaggacgaggaggagaaagagaagaagtacatgcttcct
ctggataacctgaagatcagagatgtggagaagggattcatgtctaccaaacataccttt
gctatttttaacattgagcagaggaacgtgtataaagacctgcgtcagatcgagctggca
tgcgatgctcaggaggatgtggacagctggaaggcctcattcttgcgagcaggagtgtat
cctgagaaagaccaggtggagaatggtgagggagctccagcagacaccttctccatggac
cctcagttggagaggcaggtggagacgatccggaacttggtggattcatacattggcatc
gtcaacaagagcatccgggatctcatgcccaaaaccatcatgcacctcatgatcaacagc
gccaaggagttcatccactctgagctgctggcgttcctgtactcgagtgcagatcagagt
gtgctgatggaggagggagtagatcaggctcagcacagagaagaggtgttgaggatgtac
cacgcccttaaagaggccctcggcatcatcagtgacatcagcaccaccaccatctccacc
cctctgcccccacctgtggatgacacatggatcagtacagatcccagtcctcatcctcac
ttgaagcctccaagctccgcccctccacctggccgtcctcctgcagtgagaggccccacc
cctggtcctcccccaggctccgcccctccaccactggtcccaccgattccatctcgtcca
ggtccaccacctgtgaatgcttatggaggagttttggaaccaagcaccgcccctccacca
cagatcccctctcgacctgcccgagtgcctccttctataccacctggaatccccagaaga
cctccagctgctccaaacagacccaccatcatccgcccgtttgagtcgtctctgctcgac
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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