KEGG   Silurus meridionalis (southern catfish): 124403380
Entry
124403380         CDS       T08004                                 
Symbol
papolg
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase gamma
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124403380 (papolg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124403380 (papolg)
Enzymes [BR:smeo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     124403380 (papolg)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     124403380 (papolg)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2 DUF4269
Other DBs
NCBI-GeneID: 124403380
NCBI-ProteinID: XP_046733058
Position
2:complement(14794545..14804482)
AA seq 750 aa
MKEMSASGNNMLGGQQPQKHYGITSSISLAFPRDIDHMYTQKLMEAMKPFGVFEDEDELN
HRLAVLGKLNSFVKEWIADISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVERSDFFTSFFEKLKQHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFXVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLTVTDEILLGKAEWS
KLFEPPNFFQKYKHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQ
SFPWSKESRNDNDFVSMWFIGLIFKKLENADCVNIDLTYDIQSFTDTVYRQASNINMLKD
GMTIEATHVKKKQLHQYLPAELVHRGKKKSLGDLNRSSNGGGSKRCSLDGSQLDSSRDTD
TGTPFSSPTPISKSFKSASTPDDSSTPSKPSVPMFVDSSPSPEVSPPKNEPGMSIPVIGT
KTSVAQVAKHTVPVAGSTIPTVVGRNVMPRMSPPNTSSSDLTNGLNGAAPKRPHSPSLEE
PHKKLKDTEPQVFADDYNFKEPYPPSPNGQETVDDPASEGHSITKPMPIPTIDTSRTQRL
PSKELPDASSPVPTSNLRVIKNSIRLTLNR
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgaaagaaatgtcagcttcgggaaataatatgcttggtgggcagcagcctcagaaacac
tatggcatcacatcctcaatcagcctggcctttccccgggatattgaccatatgtacact
cagaaactcatggaggctatgaaaccttttggagtgtttgaggatgaagatgagcttaat
cacaggcttgcagttcttggtaaactgaattcgtttgttaaagagtggattgcagatatc
agtgaatcaaagaatctgccaccttcagctgtagcaaatgttgggggcaaaatctttacc
tttgggtcctatagactgggagtgcacacaaaaggcgctgatattgatgccttgtgtgtg
gcacctcgacatgttgaaaggagtgattttttcacatcgttttttgaaaaactgaaacag
catgatgagatcaaggacttacgggctgtagaagatgcatttgtaccagtgatcaaattc
aagtttgatggcattgagattgatcttctttttgccagacttgccctgcagtctatccca
gataacctggaccttagaggtgattctctgctcagaaacctggatattagatgtattcgc
agtttaaacggttgtcgtgtcactgatgaaatcctgtatttggtgcccaacaaagagaac
tttagacttactctgcgggccatcaaactgtgggctaagcgtcgaggaatttactccaat
atgcttggtttcctgggtggggtgtcttgggccatgctggtggccagaacctgtcagctt
tacccaaacgctgtggcggccacacttgtgcacaaattcttcnttgtcttttccaaatgg
gagtggccaaatcctgtccttttaaagcaacctgaagacagtaacttgaatctgccagtc
tgggacccgcgggttaacccatcagacaggtaccatttgatgccaattatcacacctgca
tatccccagcaaaactctacctacaacgtgtccacctccacccgcaccatcatgagcgaa
gagttcaaatatggccttacagttacagatgaaatcctactggggaaggctgaatggtcc
aagttgttcgagccaccaaacttttttcaaaagtacaaacattatattgtgctcactgcc
agcgcctcaactgaagagaaccacctcgaatgggttgggctggtagagtcaaagattaga
gtgctggttggcaatttggagcgaaatgaatacatcacacttgctcatgtgaatccacag
tcttttccctggtcgaaggagagtcgcaatgataatgactttgtttcgatgtggttcatt
ggattaattttcaaaaagttggagaatgcagactgtgtgaacattgatctgacctacgac
atccagtcctttacagacactgtctacaggcaagccagtaacattaacatgttaaaggac
ggaatgactattgaagccacgcatgtcaagaagaagcagctacatcaatacctgcctgcg
gaacttgtgcacagaggcaagaagaagagcttgggagatcttaatcgcagttcaaatggt
ggtggatctaaacgctgttcactggatggaagtcagctggacagttccagagacacagat
acaggcaccccgttcagctctccgaccccaattagtaaaagtttcaagtcagcctccaca
cctgacgacagcagtactccatccaagccttcagttcccatgtttgtggatagctcgcca
tccccggaggtgtctcctccaaagaatgagccaggaatgtccattccagtcattggaaca
aagacatcagtcgcacaggtggccaagcacacagtgcccgttgcagggagcaccattccc
actgtggtgggccgaaacgtgatgcctcgtatgagcccgcccaacaccagttcgtctgac
ctgactaacggcctgaatggagctgcacctaagagaccccactccccttcactggaggag
ccacacaagaaactaaaagacacagagccgcaagtgtttgctgatgattataactttaaa
gaaccatacccaccttcccctaatggccaggaaacagtagatgacccagcatcagagggt
cattcaattacaaagcctatgcccattcccactatcgatacatcaaggacacagaggcta
cccagtaaagaactgccagacgcttcctctccagtacctacaagcaatttgcgtgtcatt
aagaactcaatcagactcacccttaaccgatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (11)   

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